DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinb3d

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_958764.1 Gene:Serpinb3d / 394252 MGIID:2683295 Length:387 Species:Mus musculus


Alignment Length:393 Identity:102/393 - (25%)
Similarity:196/393 - (49%) Gaps:47/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLIATSVLGKFKLNLLELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVL---DLPV 73
            |..:||:   ||.|.|...:.: :::|...||:.:...::|:|:|||..|.::::.||   :...
Mouse     3 LFAVATT---KFTLELYRQLRE-SDNNIFYSPISMMRTLAMLLLGAKANTEQQIKKVLHFNETTK 63

  Fly    74 DVTEMA----------KKYERIMSNFQKHNG---LRFTNWLYVNETY--------EVRQDYNTLM 117
            ..||.:          ::::.:|:...|.|.   |:..|.:|..:.:        ::|:.|...:
Mouse    64 KTTEKSAESHDEENVHQQFQMLMTQLNKFNNAYDLKVPNSIYGAKDFPFLQTFLKDIRKYYQANV 128

  Fly   118 KSTFMAEGKDPLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFS 182
            :|...|...:. ||:|.::.::    |:::..::.:....:|..:...||||.||:.|.|..:|.
Mouse   129 ESLDFAHAAEE-SQKKINSWMA----RQTNGKIKDLFPSGSLNSSTILVLVNAVYFKGQWNHKFD 188

  Fly   183 KKDTKLKVFHGDHNKKVYVRMMSHVGRFR--IADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSS 245
            :|.|:.:.|..:.|....|:||....:|.  ..::...:|:|:|:...:|||.:.||:....|..
Mouse   189 EKHTREEKFWLNKNTSKPVQMMKQRNKFNFIFLENVQAKIVEIPYKGKELSMFVLLPVEIDGLKK 253

  Fly   246 IE------KILR-TLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFS-NTSDLSGLLTN 302
            .|      |:|: |.:|::....:::.||:||::.:.:|...|:.:|:...|. ..:|.|| ::|
Mouse   254 FEEQLTADKLLQWTRAENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQKADFSG-MSN 317

  Fly   303 GTGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFR 365
            ..|..::.|:||||:|:||.||....|.. .||..........|..|.||:|:::...|  :.|.
Mouse   318 SQGLVVSKVLHKSFVEVNEEGAEAATAMS-VESRSLSVPKPNDFSCNHPFLFVMKQNKTNSILFF 381

  Fly   366 GRV 368
            |||
Mouse   382 GRV 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 97/381 (25%)
Serpinb3dNP_958764.1 SERPIN 7..387 CDD:294093 101/389 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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