DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinb1c

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:412 Identity:115/412 - (27%)
Similarity:184/412 - (44%) Gaps:93/412 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IATSVLGKF----KLNLLELVMDKAES----NFIASPLCIEIGISMILMGAKGTTAEELRSVLDL 71
            :|...:|:.    .|..|||.....||    |.|.||:.|...::|:.:||:|:||.:|...|..
Mouse    29 VAAFTMGQLSSANNLFALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHF 93

  Fly    72 PVDVTEMAKKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRK 133
            . ...::..:::.:.:...|...   |:..|.||..:||....:|...::.|:.|:         
Mouse    94 D-SAEDIHSQFQSLTAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSAD--------- 148

  Fly   134 ASNSISFSIHRKSHKGMRTISNDHNLQINE-----------------------SAVLVNTVYYSG 175
                  .::....|     .|.|...:||:                       ..||||..|:.|
Mouse   149 ------LALVDFQH-----ASEDARKEINQWVKGQTEEKIQELFAVGVVDSMTKLVLVNATYFKG 202

  Fly   176 AWKTRFSKKDTKLKVFHGDHNKKV--YVRMMSHVGRFRIADHSYG-------QIIEMPFDNSDLS 231
            .|:.:|..:||....|.  .:|||  .|:||     :...:..:|       :::|||:...:||
Mouse   203 MWQKKFMARDTTDAPFR--LSKKVTKTVKMM-----YLKNNLPFGYIPDLKCKVLEMPYQGGELS 260

  Fly   232 MIIGLPL----HNTYLSSIEKILRTLS-----ESLVENNVHVELPKFKIKYQTELVESLKKLGIH 287
            |:|.||.    ..|.|..|||.| ||.     |:|...:|.|:|||||::....|..:|.:||:.
Mouse   261 MVILLPEDIEDETTGLEEIEKQL-TLEKLQECENLQNIDVCVKLPKFKMEESYILNSNLGQLGVQ 324

  Fly   288 LIFSNT-SDLSGLLTNGTGAK---INHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKV 348
            .:||:: :||||:    :|::   |:.:||||::|:||.|..|..|.  ..::.........|.|
Mouse   325 DLFSSSKADLSGM----SGSRDLFISKIVHKSYVEVNEEGTETDAAM--PGTVVGCCLMPMEFTV 383

  Fly   349 NRPFVFLIRDKHT--VYFRGRV 368
            :.||:|.||...|  |.|.|||
Mouse   384 DHPFLFFIRHNPTAHVLFLGRV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 111/403 (28%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 114/407 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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