DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinb1c

DIOPT Version :10

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:412 Identity:115/412 - (27%)
Similarity:184/412 - (44%) Gaps:93/412 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IATSVLGKF----KLNLLELVMDKAES----NFIASPLCIEIGISMILMGAKGTTAEELRSVLDL 71
            :|...:|:.    .|..|||.....||    |.|.||:.|...::|:.:||:|:||.:|...|..
Mouse    29 VAAFTMGQLSSANNLFALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHF 93

  Fly    72 PVDVTEMAKKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRK 133
            . ...::..:::.:.:...|...   |:..|.||..:||....:|...::.|:.|:         
Mouse    94 D-SAEDIHSQFQSLTAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSAD--------- 148

  Fly   134 ASNSISFSIHRKSHKGMRTISNDHNLQINE-----------------------SAVLVNTVYYSG 175
                  .::....|     .|.|...:||:                       ..||||..|:.|
Mouse   149 ------LALVDFQH-----ASEDARKEINQWVKGQTEEKIQELFAVGVVDSMTKLVLVNATYFKG 202

  Fly   176 AWKTRFSKKDTKLKVFHGDHNKKV--YVRMMSHVGRFRIADHSYG-------QIIEMPFDNSDLS 231
            .|:.:|..:||....|.  .:|||  .|:||     :...:..:|       :::|||:...:||
Mouse   203 MWQKKFMARDTTDAPFR--LSKKVTKTVKMM-----YLKNNLPFGYIPDLKCKVLEMPYQGGELS 260

  Fly   232 MIIGLPL----HNTYLSSIEKILRTLS-----ESLVENNVHVELPKFKIKYQTELVESLKKLGIH 287
            |:|.||.    ..|.|..|||.| ||.     |:|...:|.|:|||||::....|..:|.:||:.
Mouse   261 MVILLPEDIEDETTGLEEIEKQL-TLEKLQECENLQNIDVCVKLPKFKMEESYILNSNLGQLGVQ 324

  Fly   288 LIFSNT-SDLSGLLTNGTGAK---INHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKV 348
            .:||:: :||||:    :|::   |:.:||||::|:||.|..|..|.  ..::.........|.|
Mouse   325 DLFSSSKADLSGM----SGSRDLFISKIVHKSYVEVNEEGTETDAAM--PGTVVGCCLMPMEFTV 383

  Fly   349 NRPFVFLIRDKHT--VYFRGRV 368
            :.||:|.||...|  |.|.|||
Mouse   384 DHPFLFFIRHNPTAHVLFLGRV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 114/409 (28%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 114/407 (28%)

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