DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Spn42De

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster


Alignment Length:363 Identity:101/363 - (27%)
Similarity:187/363 - (51%) Gaps:20/363 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLP-VDVTEMAKKYERIMS--NFQ 90
            :|...::..|.:.||..|..|:::..:||:|:||:||:..|.|. ...||:|:|.:::::  .::
  Fly    42 QLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKLDQLLAKGQWE 106

  Fly    91 KHNG------LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRKASNS--ISFSIHRKSH 147
            |.:|      |::.|.::|.:.:::.|.|..|:...|.|..::....:||..:  |:..:..::|
  Fly   107 KASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHINSWVEEQTH 171

  Fly   148 KGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRFRI 212
            :.::.:....:|..:.||:|||.:|:...|::.|....|....|.....:||.|..||....||.
  Fly   172 QQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTMSQEDYFRF 236

  Fly   213 AD--HSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEK-----ILRTLSESLVENNVHVELPKFK 270
            .:  ....:::|:|:..:|:..:|.||.....|:.:|:     .|..:|..|....|.|:|||||
  Fly   237 GELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQLRRRKVRVQLPKFK 301

  Fly   271 IKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINERGASTGEASDHAES 335
            .::...|..:|::|||..:||..::||.|.......:|:.|.||:.||:||:|.:...|:....|
  Fly   302 FEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGTTASGATFIKVS 366

  Fly   336 IQKKTRASTSFK--VNRPFVFLIRDKHTVYFRGRVVRL 371
            ::..|.....|:  .:.||.|.|:|.....|.|.|.:|
  Fly   367 VESLTIGEEVFEFIADHPFFFAIKDAQNTLFLGHVSQL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 99/358 (28%)
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 99/358 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468711
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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