DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Spn28Da

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:378 Identity:166/378 - (43%)
Similarity:238/378 - (62%) Gaps:23/378 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKYLVLLLIATSVLGKFKLNLL-ELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLD 70
            :|||..:|:.|||||:|...|. ..:.|..:.|.||||||:|||:|||||||.|.||.|||:.|:
  Fly     1 MKYLCWILVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN 65

  Fly    71 LPVDVTEMAKKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKD-PLSQ 131
            ||.|...:|..|:::::..::...   |...|.|:||||..|.:.||.|:...|.||.:. .|:.
  Fly    66 LPEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLAD 130

  Fly   132 R-KASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDH 195
            | ||:.:|:..:..::...::.|....:|..:||||::|..::.|.|||||.|.:||.|||:...
  Fly   131 RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSK 195

  Fly   196 NKKVYVRMMSHVGRFRIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLSE-SLVE 259
            :.:|.|.|||.||||::...:..||||:||..|:|||:|.||..|..|:..|..:.:..: .|.|
  Fly   196 SYQVNVNMMSQVGRFKMRTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTE 260

  Fly   260 NNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINERGA 324
            .:|||:||||||.::.||||:||.:||..:|:::||:|.|| |.:|.:|:.||||:||||:|.|.
  Fly   261 MDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLL-NQSGTRISQVVHKAFIEIDEEGG 324

  Fly   325 STGEA--------SDHAESIQKKTRASTSFKVNRPFVFLIRDKHTVYFRGRVV 369
            |.|.|        ||:|.|:       .:|.||.||||:|||...:|||||||
  Fly   325 SAGSASASPIRGLSDYATSV-------VTFTVNSPFVFMIRDDDNIYFRGRVV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 154/360 (43%)
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 154/360 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468697
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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