DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Db and Serpinb6el1

DIOPT Version :10

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006253935.2 Gene:Serpinb6el1 / 306889 RGDID:1564786 Length:420 Species:Rattus norvegicus


Alignment Length:403 Identity:106/403 - (26%)
Similarity:191/403 - (47%) Gaps:62/403 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YLVLLLIATSVL-------GKFKLNLLELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELR 66
            ::|:|....:::       |.|.:.|.:::.:....|...|...|...:|||||||.||||.::.
  Rat    32 FIVILHSRLTIMDPLLKANGNFAIKLFKVLGEDISKNVFFSLPSISSALSMILMGANGTTASQIC 96

  Fly    67 SVLDLPV-------DVTEMAKKYERIMSNFQKHNG------LRFTNWLYVNETYEVRQDYNTLMK 118
            ..:.|..       ||      ::..:|...|.|.      ||..|.:::.:::|:...:.....
  Rat    97 QAMSLDKCNSIGGGDV------HQHFLSLLTKVNKTDTRCMLRKANSVFIEDSFEILASFKDACH 155

  Fly   119 STFMAEGKD------PLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAW 177
            ..:.||.::      |...|:..|:   .:.:|:...:|.:.....:..|....|||.:|:.|:.
  Rat   156 KLYEAEIEELDFKGAPEQSRQHINT---WVAKKTEDIIRELLPPCTVNSNTCLFLVNVIYFKGSL 217

  Fly   178 KTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRFR---IADHSYGQIIEMPFDNSDLSMIIGLP-- 237
            :..|:|.||:...|....|:|..|:|||....|:   :.|.| .|::.:||:||.|||...:|  
  Rat   218 EKPFNKADTREMPFKVSMNEKKTVQMMSQKSTFKMTYVKDIS-TQVLTLPFENSILSMYFFVPDS 281

  Fly   238 ------LHN--TYLSSIEKILR-TLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIF-SN 292
                  |.|  ||    :|.|. |..:::.|..:.|.||:.|::...::...|:|||:...| .:
  Rat   282 HVAQRKLENELTY----DKFLEWTDEDTMEEKEMEVFLPRIKLEESYDMNGVLRKLGMTDAFEED 342

  Fly   293 TSDLSGLLTNGTGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKV-NRPFVFLI 356
            .:|.|| :::..|..::.||||||:|::|.|.   ||:...:.:..|:..:....: :.||:|.|
  Rat   343 KADFSG-ISSKHGLFLSKVVHKSFVEMSEEGT---EAAAPTDVVTMKSPLTPRCLIADHPFLFSI 403

  Fly   357 RDKHT--VYFRGR 367
            :|..:  :.|.||
  Rat   404 QDTRSKEILFLGR 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 104/394 (26%)
Serpinb6el1XP_006253935.2 serpin 43..420 CDD:476815 104/392 (27%)

Return to query results.
Submit another query.