DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinc1

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:458 Identity:116/458 - (25%)
Similarity:196/458 - (42%) Gaps:108/458 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IATSVLGKFKLNLLELVM-----------DKAESNFIASPLCIEIGISMILMG-AKGTTAEELRS 67
            |.::|.|:.||.||.|::           :..:...||.|..|.:....|... ||..|.|:   
  Rat     6 IGSAVAGERKLCLLSLLLIGALGCAVCHGNPVDDICIAKPRDIPVNPMCIYRSPAKKATEED--- 67

  Fly    68 VLDLPVD------VTEMAKKYERIMSNFQKH-------NGLRFTNWLYVNETYEVRQ--DYNTLM 117
            ||:..|.      |.|::|...|..:||.:|       |...|.:.|.::..:.:.:  ..|..:
  Rat    68 VLEQKVPEATNRRVWELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTL 132

  Fly   118 KSTFMAEGKDPLSQRKASNSISF-------SIHRKSHKGMRTIS-----NDHNLQINES------ 164
            |........|.:|: |.|:.|.|       .::||::|....:|     .|.:|..|||      
  Rat   133 KQLMEVFKFDTISE-KTSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLTFNESYQDVSE 196

  Fly   165 -------------------------------------------------AVLVNTVYYSGAWKTR 180
                                                             .|||||:|:.|.||::
  Rat   197 IVYGAKLQPLDFKENPEQSRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSK 261

  Fly   181 FSKKDTKLKVFHGDHNKKVYVRMMSHVGRFRIADHSYG-QIIEMPFDNSDLSMIIGLPLHNTYLS 244
            ||.::|:.:.||....:...|.||...|:|:......| |::||||...|::|::.||.....|:
  Rat   262 FSPENTRKEPFHKVDGQSCLVPMMYQEGKFKYRRVGEGTQVLEMPFKGDDITMVLILPKPEKSLA 326

  Fly   245 SIE-----KILRTLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFS-NTSDLSGLLTNG 303
            .:|     ::|:...:.|.|..:.|.:|:|:|:....|.|.|:.:|:..:|| ..|.|.|::..|
  Rat   327 KVEQELTPELLQEWLDELSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEG 391

  Fly   304 -TGAKINHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRD--KHTVYFR 365
             ....::...||:|:|:||.|:....::....:.:....:..:||.||||:.|||:  .:|:.|.
  Rat   392 RDDLFVSDAFHKAFLEVNEEGSEAAASTSVVITGRSLNPSRVTFKANRPFLVLIREVALNTIIFM 456

  Fly   366 GRV 368
            |||
  Rat   457 GRV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 111/449 (25%)
Serpinc1NP_001012027.1 antithrombin-III_like 80..459 CDD:239000 94/379 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

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