DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinb11

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006249694.2 Gene:Serpinb11 / 304689 RGDID:1306497 Length:522 Species:Rattus norvegicus


Alignment Length:382 Identity:107/382 - (28%)
Similarity:183/382 - (47%) Gaps:33/382 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TSVLGKFKLNLL-ELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLD-------LPV 73
            |:...:|.|::. ||.......|...|||.....:||:|:||:|.:||::..||.       |..
  Rat   139 TTANTEFCLDVFKELSSSNVGENIFFSPLTTFYALSMLLLGARGKSAEQMEKVLHYDNFSGFLKA 203

  Fly    74 DVT---------EMAKKYERIMSNFQKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKD-- 127
            .:.         .|..::..::|:..:.|.|...|.:|..:..|..:.|....:..:.|:.:.  
  Rat   204 KIKNSSECSQGGRMHPEFRALVSHINQQNSLSIANRIYGTKAIEFHKQYIRCCEKLYQAKLQTVD 268

  Fly   128 -PLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVF 191
             .||..:...||:..:..|:|..:..:.:...:..:...|||:.:|:.|.|:.:|.|.:|....|
  Rat   269 FELSAEETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKTETVKAPF 333

  Fly   192 HGDHNKKVYVRMMSHVGRFRIA--DHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILR--- 251
            |....|...|.||...|.|::|  .....|::|:|:.|:.|.|||.||:....::.|||.|.   
  Rat   334 HISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGTASVNQIEKHLNAKM 398

  Fly   252 ----TLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFS-NTSDLSGLLTNGTGAKINHV 311
                |...::||..|.|.:|||.:..:.:|...||.||:..||: ..:|||| ::...|..::.|
  Rat   399 LREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADLSG-MSPDKGLYLSKV 462

  Fly   312 VHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDK-HTVYFRGR 367
            ||||::::||.|.....|:....|: |:...:..|..|.||:|.|.|: :.:.|.|:
  Rat   463 VHKSYVDVNEEGTEAAAATGETISV-KRLPVTVQFTANCPFLFFIWDEFYNILFAGK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 106/377 (28%)
Serpinb11XP_006249694.2 SERPIN 138..522 CDD:294093 107/382 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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