DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinb1a

DIOPT Version :10

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001026812.1 Gene:Serpinb1a / 291091 RGDID:1306203 Length:379 Species:Rattus norvegicus


Alignment Length:379 Identity:113/379 - (29%)
Similarity:180/379 - (47%) Gaps:53/379 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LELVMDKAES----NFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIMSN 88
            |||....:||    |...||..|...::|:.:|.|||||.:|....... .|.::..:::.:.:.
  Rat    13 LELFHTLSESSPTGNIFFSPFSISSALAMVFLGTKGTTAAQLSKTFHFD-SVEDVHSRFQSLNAE 76

  Fly    89 FQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKD--PLSQRKASNSISFSIHRKSHK 148
            ..|...   |:..|.||..:||....::.|   ||....|.|  |:..:.||......|::.. |
  Rat    77 VSKRGASHTLKLANRLYGEKTYNFLPEFLT---STQKMYGADLAPVDFQHASEDARKEINQWV-K 137

  Fly   149 GMRTISNDHNLQIN-----ESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVG 208
            |.........|.:.     ...||||.:|:.|.|:.:|.|:||....|..:......|:||....
  Rat   138 GQTEGKIPELLAVGVVDSMTKLVLVNAIYFKGMWEEKFMKQDTTDAPFRLNKKNTKSVKMMYQKK 202

  Fly   209 RF---RIADHSYGQIIEMPFDNSDLSMIIGLPL----HNTYLSSIEKILR-------TLSESLVE 259
            :|   .|:|... :::|||:...:|||:|.||.    .:|.|..||:.:.       |..|:|..
  Rat   203 KFFFGYISDLKC-KVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQITLEKLREWTKRENLEN 266

  Fly   260 NNVHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAK---INHVVHKSFIEIN 320
            .:|||:||:|||:....|..:|.:||:..:| |:.:||||:    :|::   |:.:|||:|:|:|
  Rat   267 IDVHVKLPRFKIEESYILNSNLGRLGLQDLFNSSKADLSGM----SGSRDLFISKIVHKAFVEVN 327

  Fly   321 ERG----ASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGRV 368
            |.|    |:|...:.....:.::     .|..:.||:|.||...|  |.|.|||
  Rat   328 EEGTEAAAATAGIATFCMLLPEE-----EFTADHPFIFFIRHNPTANVLFLGRV 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 113/379 (30%)
Serpinb1aNP_001026812.1 serpinB1_LEI 1..379 CDD:381028 113/379 (30%)

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