DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpinb6a

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:380 Identity:99/380 - (26%)
Similarity:182/380 - (47%) Gaps:46/380 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GKFKLNLLELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPV-------DVTEM 78
            |.|.|.||:.:.:.:.:|...||:.|...::|:.|||||.||.::...|.|..       ||.: 
  Rat    30 GIFALKLLKTLSEDSSNNIFLSPISISAALTMVFMGAKGMTASQMVQTLSLDKCSGNGGGDVHQ- 93

  Fly    79 AKKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAE-------GKDPLSQRK 133
              .::.:::...|...   |:..|.|:..:|.::...:....:..:.||       |....|:::
  Rat    94 --GFQSLLAEVNKTGTQYLLKTANRLFGEKTCDILASFKDACRKFYEAEMEELDFKGDTEQSRQR 156

  Fly   134 ASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKK 198
                |:..:.:|:...::.:.....:..:...||||.:|:.|.|..:|:|:.|:.|.|.....::
  Rat   157 ----INTWVAKKTEDKIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKEHTREKPFKVSKTEE 217

  Fly   199 VYVRMMSHVGRFRIA--DHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILR-------TLS 254
            ..|:||.....|::.  ...:.:|:.:|:..::|:|||.||..:..|.::||.|.       |..
  Rat   218 KPVQMMFMKSTFKMTYIGEIFTKILLLPYAGNELNMIIMLPDEHIELKTVEKELTYEKFIEWTRL 282

  Fly   255 ESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAKINHVVHKSFIE 318
            :.|.|..|.|.||:||::...::...|.|||:...| ...:|.||:.:. .|..::.|:||:|:|
  Rat   283 DMLDEEEVEVFLPRFKLEENYDMKVVLGKLGMTDAFMEGRADFSGIASK-QGLFLSKVIHKAFVE 346

  Fly   319 INERG----ASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGR 367
            :||.|    |:||     :....:..|.:..|..:.||:|.|:...|  :.|.||
  Rat   347 VNEEGTEAVAATG-----STITMRCLRFTPRFLADHPFLFFIQHVKTKGILFCGR 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 98/379 (26%)
Serpinb6aXP_006253933.1 SERPIN 25..400 CDD:294093 99/380 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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