DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpina4

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:383 Identity:86/383 - (22%)
Similarity:164/383 - (42%) Gaps:54/383 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKLNLLELVMDK-AESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIM 86
            |...|..|:..: :|.|...|||.|.:.::::..||.|.|..::...|...:....:.:.:|...
  Rat    55 FAFRLYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPEIHEGFR 119

  Fly    87 SNFQKHNGLR-FT-------NWLYVNETYEVRQDYNTLMKSTF-----MAEGKDPLSQRKASNSI 138
            |  .:|...| ||       :.|.:::..::..::.:.:::::     .|..:|   :..|...|
  Rat   120 S--LQHTIARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRD---KEAAVQLI 179

  Fly   139 SFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRM 203
            :..:.:.:...::.:.:|  |..:...||||.:::.|.||..|.........|:.|.|..|.:.|
  Rat   180 NNYVKQNTQGKIKNLVSD--LSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVVKIPM 242

  Fly   204 MSHVGRFRIADHSYGQ-------IIEMPFDNSDLSMIIGLPLHNTYLSSIEKIL---------RT 252
            |.....    ||.|.:       ::.|.:....::..| || ....::.:|::|         |.
  Rat   243 MLQDKE----DHWYLEDRRVPCTVLRMDYRGDAVAFFI-LP-DQGKMNEVEQVLSPGMLLRWKRL 301

  Fly   253 LSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFI 317
            |........:.::||||.|....||.|.|..||...:|:..::.|. ::......::.|.||:.:
  Rat   302 LQNRFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSN-ISKKEKLYLSKVFHKTVL 365

  Fly   318 EINERG----ASTGEASDHAESIQKKTRASTSFKVNRPFVFLI--RDKHTVYFRGRVV 369
            ::||.|    |:||..:... |.|.|.|   ....||||:.::  .....:.|.|:||
  Rat   366 DVNEVGTKAAAATGSFATFF-SAQPKKR---YLIFNRPFLVILYSTSSQDILFMGKVV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 84/380 (22%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 84/380 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.110

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