DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Db and Serpinb9b

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_035582.1 Gene:Serpinb9b / 20706 MGIID:894668 Length:377 Species:Mus musculus


Alignment Length:381 Identity:104/381 - (27%)
Similarity:171/381 - (44%) Gaps:50/381 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GKFKLNLLELVMDKAES-NFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYER 84
            |.|.::||:::.....| |...||:.|...::|:|:|||..||.::...|.|        ||.:.
Mouse     9 GTFAIHLLKMLCQSNPSKNVCFSPVSISSALAMVLLGAKEQTAVQISQALGL--------KKEKG 65

  Fly    85 IMSNFQK----------HNGLRFTNWLYVNETYEVRQDYNTLMKSTFMAEG---------KDPLS 130
            |...|.|          ...|...|.|:.::|.||.|   |..:|.|....         |..:.
Mouse    66 IHQGFLKLLRKLNKPDRKYSLIVANRLFADKTCEVLQ---TFKESCFRFYDSEMEQVNFFKAAVE 127

  Fly   131 QRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDH 195
            .|:..|:   .:.:::...:..:..|.::......||||.:|:.|.|..:|.|:.|:...|:.:.
Mouse   128 SRQCINT---WVSKQTEGKIPELLADDSVNFQTRLVLVNALYFKGMWACQFCKESTREMPFYINK 189

  Fly   196 NKKVYVRMMSHVGRFRIA--DHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEK-------ILR 251
            ::|..|:||.....|..|  |....:::.||::..:||:::.||.....||.:|.       |..
Mouse   190 DEKRPVQMMCQTDTFMFAFVDELPARLLIMPYEGMELSLMVLLPEKGVDLSKVENDLTFEKLIAW 254

  Fly   252 TLSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIF-SNTSDLSGLLTNGTGAKINHVVHKS 315
            |..:.:....|.|.|||||::...|:...|:.|||..:| ...:|||. ::......::..:|||
Mouse   255 TKPDIMWSTEVKVFLPKFKLQEDYEMKSVLQCLGIVDVFEKEKADLSA-MSPERNLCLSKFIHKS 318

  Fly   316 FIEINERGASTGEASDHAESIQKKTRAS--TSFKVNRPFVFLIRDKHT--VYFRGR 367
            .:|:||.|.....||. ||.|.......  :.|..:.||:|.||...|  :.|.||
Mouse   319 VVEVNEEGTEAAAASS-AEGIIPLCLGGGPSWFCADHPFLFFIRHNQTNSILFCGR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 103/380 (27%)
Serpinb9bNP_035582.1 SERPIN 4..377 CDD:294093 104/381 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.