DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpina1c

DIOPT Version :10

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:403 Identity:92/403 - (22%)
Similarity:163/403 - (40%) Gaps:86/403 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IATSVLGKFKLNLL-ELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEM 78
            |||: ||.|.::|. |||.....||...||:.|....:|:.:|:||.|..::...|...:..|..
Mouse    44 IATN-LGDFAISLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSE 107

  Fly    79 A---KKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRKASNS 137
            |   |.::.::....:.:.   |...|.|:||...::.:.:....|:.:.||             
Mouse   108 ADIHKSFQHLLQTLNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAE------------- 159

  Fly   138 ISFSIHRKSHKGMRTISND--------------HNLQINESAVLVNTVYYSGAWKTRFSKKDTKL 188
             .||::....:..:.:.||              ..|..:....|.|.:.:.|.||..|..::|:.
Mouse   160 -VFSVNFAESEEAKKVINDFVEKGTQGKIAEAVKKLDQDTVFALANYILFKGKWKKPFDPENTEE 223

  Fly   189 KVFHGDHNKKVYVRMMSHVGRFRIADHS--YGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILR 251
            ..||.|.:..|.|.||:..|...:...|  ...::.|.:..:..::.: ||..    ..::.:.:
Mouse   224 AEFHVDESTTVKVPMMTLSGMLDVHHCSTLSSWVLLMDYAGNATAVFL-LPDD----GKMQHLEQ 283

  Fly   252 TLSESLVENNV--------HVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKI 308
            |||:.|:...:        .:..|:..|..:..|...:..|||..||:|.:||||:.......|:
Mouse   284 TLSKELISKFLLKRPRRLAQIHFPRLSISGEYNLKTLMSPLGITRIFNNGADLSGITEENAPLKL 348

  Fly   309 NHVVHKSFIEINERGASTGEAS---------------DHAESIQKKTRASTSFKVNRPFVFLIRD 358
            :..|||:.:.::|.|.....|:               ||                  ||:|:|.:
Mouse   349 SQAVHKAVLTMDETGTEAAAATVLLAVPYSMPPIVRFDH------------------PFLFIIFE 395

  Fly   359 KHT--VYFRGRVV 369
            :||  ..|.|:||
Mouse   396 EHTQSPLFVGKVV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 89/400 (22%)
Serpina1cNP_033271.1 serpinA1_A1AT 44..412 CDD:381012 92/403 (23%)

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