DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Serpina1c

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:403 Identity:92/403 - (22%)
Similarity:163/403 - (40%) Gaps:86/403 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IATSVLGKFKLNLL-ELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEM 78
            |||: ||.|.::|. |||.....||...||:.|....:|:.:|:||.|..::...|...:..|..
Mouse    44 IATN-LGDFAISLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSE 107

  Fly    79 A---KKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRKASNS 137
            |   |.::.::....:.:.   |...|.|:||...::.:.:....|:.:.||             
Mouse   108 ADIHKSFQHLLQTLNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAE------------- 159

  Fly   138 ISFSIHRKSHKGMRTISND--------------HNLQINESAVLVNTVYYSGAWKTRFSKKDTKL 188
             .||::....:..:.:.||              ..|..:....|.|.:.:.|.||..|..::|:.
Mouse   160 -VFSVNFAESEEAKKVINDFVEKGTQGKIAEAVKKLDQDTVFALANYILFKGKWKKPFDPENTEE 223

  Fly   189 KVFHGDHNKKVYVRMMSHVGRFRIADHS--YGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILR 251
            ..||.|.:..|.|.||:..|...:...|  ...::.|.:..:..::.: ||..    ..::.:.:
Mouse   224 AEFHVDESTTVKVPMMTLSGMLDVHHCSTLSSWVLLMDYAGNATAVFL-LPDD----GKMQHLEQ 283

  Fly   252 TLSESLVENNV--------HVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKI 308
            |||:.|:...:        .:..|:..|..:..|...:..|||..||:|.:||||:.......|:
Mouse   284 TLSKELISKFLLKRPRRLAQIHFPRLSISGEYNLKTLMSPLGITRIFNNGADLSGITEENAPLKL 348

  Fly   309 NHVVHKSFIEINERGASTGEAS---------------DHAESIQKKTRASTSFKVNRPFVFLIRD 358
            :..|||:.:.::|.|.....|:               ||                  ||:|:|.:
Mouse   349 SQAVHKAVLTMDETGTEAAAATVLLAVPYSMPPIVRFDH------------------PFLFIIFE 395

  Fly   359 KHT--VYFRGRVV 369
            :||  ..|.|:||
Mouse   396 EHTQSPLFVGKVV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 85/393 (22%)
Serpina1cNP_033271.1 SERPIN 53..410 CDD:214513 86/393 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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