DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and LOC110439158

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:376 Identity:87/376 - (23%)
Similarity:161/376 - (42%) Gaps:57/376 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVL---DLPVDVTEMAKKYERIMSNFQKHNG 94
            |....|...||..:.:.:|.:.:||.|.|.::|.|.:   .......||.:.:..::.:.....|
Zfish    56 DYQSKNIFFSPFTVSMALSKLTLGAGGDTKQQLLSGIGYNSAIFSTEEMHQLFHSLLEDIGNRTG 120

  Fly    95 --LRFTNWLYVNETYEVRQDYNTLMKSTFMAEG-------KDPLSQRKASNSISFSIHRKSHKGM 150
              :.....||.::.::....:...||..:..:|       |:.:.|      |:..:..|:|..:
Zfish   121 VDIDIGTALYASDRFKPHSKFLEDMKEFYHTDGFTVDFRVKETVDQ------INKYVEEKTHGKI 179

  Fly   151 RTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVRMMSHVGRFRIADH 215
            ....:|  |:.:....|:..:|:.|.|...|:.:.|....||.|....|.|:||          |
Zfish   180 NQAVDD--LEKDTLMFLLTYIYFKGKWDKPFNPEKTCESTFHIDDKTTVPVQMM----------H 232

  Fly   216 SYGQIIEMPFD------------NSDLSMIIGLPLHNTYLSSIEKILRTLS--------ESLVEN 260
            .| :.:::.:|            |...||.:.:|..:....:||.:..|:|        .|..|.
Zfish   233 QY-EYLKVYYDAELSIKVLCLDYNDSFSMFLAVPDVHMGRKTIEDLEMTISRQHIEKWKRSAFER 296

  Fly   261 NVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINERGAS 325
            .|.:.:||..:|....|.:.||.:|:..:||:.:|.:|:  :.....|:.||||:.::|:|:| :
Zfish   297 KVDIYVPKLSLKTSYFLNDILKGMGMADMFSDKADFTGV--SEEKIFISKVVHKATLDIDEKG-T 358

  Fly   326 TGEASDHAESIQKKTRASTSFKVNRPFVFLIRDK--HTVYFRGRVVRLPNE 374
            |..|....:..|......::...:|||:..|.|:  ..:.|.|:||. |||
Zfish   359 TAAAVTTVQFRQLSYSPLSTLSFDRPFMIFITDQTNDNILFFGKVVN-PNE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 82/368 (22%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 82/368 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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