DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and serpinh1

DIOPT Version :9

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_002937290.2 Gene:serpinh1 / 100490491 XenbaseID:XB-GENE-1005105 Length:450 Species:Xenopus tropicalis


Alignment Length:389 Identity:94/389 - (24%)
Similarity:164/389 - (42%) Gaps:77/389 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NLLE-LVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIMSNF 89
            ||.: :..||...|.:.||:.:...:.::.:|.:.:||.:.::||.        |.|    :|:.
 Frog    85 NLYQTMAKDKNVENILLSPVVVASSLGLVSLGGQASTAAQAKAVLS--------ADK----LSDE 137

  Fly    90 QKHNGL------------RFTNW-----LYVNETYEVRQDYNTLMKSTFMAEGKDPLSQRKASNS 137
            ..|:||            |...|     ||...:.....|:....|..:..|          .:.
 Frog   138 HIHSGLAELLNEVSNSTARNVTWKIGNRLYGPSSISFTDDFVKNSKKHYNYE----------HSK 192

  Fly   138 ISFSIHRKSHKGMRTISN-------------DHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLK 189
            |:|   |.....:|:|:.             ..:::..:.|::||.:::...|..||..:....:
 Frog   193 INF---RDKRSTLRSINEWASQATDGKLPEVTSDMERTDGALIVNAMFFKPHWDERFHHQMVDNR 254

  Fly   190 VFHGDHNKKVYVRMMSHVGRFR-IADHSYG-QIIEMPFDNSDLSMIIGLPLHNTYLSSIEKIL-- 250
            .|....:..|.|.||...|.:. :.|...| ||:|||..:...||:..:|.|...|..:||:|  
 Frog   255 GFMVTRSFTVSVPMMHRTGLYNYLEDEKNGLQILEMPLAHKLSSMLFIMPHHVEPLERVEKLLTR 319

  Fly   251 ---RTLSESLVENNVHVELPKFKIKYQTELVESLKKLGI-HLIFSNTSDLSGLLTNGTGAK---I 308
               :|....:.:..|.|.|||..::...:|.:.|..||: ..|....:|||.:    :|.|   :
 Frog   320 EQVKTWVGKMTKKAVAVSLPKVSLEVSHDLQKHLGDLGLTEAIDKTKADLSKI----SGKKDLYL 380

  Fly   309 NHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGRVVR 370
            ..:.|.:.:|.:    :.|...|.....:::.||...|.|:.||||||:|:.|  :.|.||:||
 Frog   381 ASMFHAAALEWD----TDGNPFDSDIYSREELRAPKLFYVDHPFVFLIKDEKTDSILFIGRLVR 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 91/385 (24%)
serpinh1XP_002937290.2 serpinH1_CBP1 68..449 CDD:381003 94/389 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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