DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4EHP and LSP1

DIOPT Version :9

Sequence 1:NP_001163710.1 Gene:eIF4EHP / 326255 FlyBaseID:FBgn0053100 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001332369.1 Gene:LSP1 / 833534 AraportID:AT5G35620 Length:198 Species:Arabidopsis thaliana


Alignment Length:206 Identity:58/206 - (28%)
Similarity:93/206 - (45%) Gaps:34/206 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LPPLEVGPGENRLQHTYCLWFSRKETQRAAADYSKSLHMVGRCASVQQWWSLYSHLIRPTALKPY 100
            ||..|.....::|:..:..||..:..:.||  :..||.......:|:.:|.|:..:.:.:.|...
plant    16 LPATEAEKQPHKLERKWSFWFDNQSKKGAA--WGASLRKAYTFDTVEDFWGLHETIFQTSKLTAN 78

  Fly   101 RELLLFKQGIIPMWEDPANSKGGQW---LIRLRKNKVDRAWENVCMAMLGEQFLVGDEICGVVL- 161
            .|:.|||.|:.|.||||..:.||:|   :...||..:|:.|....||::||||...|||||||. 
plant    79 AEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVVAS 143

  Fly   162 ---QTKYPNPSIQVACSSRPIICIIYTRFVVQFGK--CKIIIVTNNNKRNVYEFLTIIVIKIHEE 221
               |:|....|:.....|...:       ::..||  .:|:.||:.           |....|::
plant   144 VRPQSKQDKLSLWTRTKSNEAV-------LMGIGKKWKEILDVTDK-----------ITFNNHDD 190

  Fly   222 MLSLLSRKCKF 232
                 ||:.:|
plant   191 -----SRRSRF 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4EHPNP_001163710.1 IF4E 50..>172 CDD:279921 43/128 (34%)
LSP1NP_001332369.1 IF4E 27..185 CDD:396291 51/177 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5053
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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