DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4EHP and ife-3

DIOPT Version :9

Sequence 1:NP_001163710.1 Gene:eIF4EHP / 326255 FlyBaseID:FBgn0053100 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_503123.1 Gene:ife-3 / 178536 WormBaseID:WBGene00002061 Length:251 Species:Caenorhabditis elegans


Alignment Length:182 Identity:57/182 - (31%)
Similarity:86/182 - (47%) Gaps:29/182 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMEKVANKQYETKNWPDIVDSDDSDVDNQIDVDNLPP--LEVGPGENRLQHTYCLWFSRKETQR 63
            ||.....||......  |:..||.|          :||  |...|    ||:.:.||:.:.:..:
 Worm     1 MSTSVAENKALSASG--DVNASDAS----------VPPELLTRHP----LQNRWALWYLKADRNK 49

  Fly    64 AAADYSKSLHMVGRCASVQQWWSLYSHLIRPTALKPYRELLLFKQGIIPMWEDPANSKGGQWLIR 128
               ::...|.||....:|:.:||||:|:.....|....:..|||:||.|||||..|.:||:||:.
 Worm    50 ---EWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVV 111

  Fly   129 LRKNK-------VDRAWENVCMAMLGEQF-LVGDEICGVVLQTKYPNPSIQV 172
            :.|.|       :|..|..:.||::|||| ..||.|||.|:..:.....:.:
 Worm   112 VDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSL 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4EHPNP_001163710.1 IF4E 50..>172 CDD:279921 43/129 (33%)
ife-3NP_503123.1 IF4E 36..195 CDD:279921 43/131 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.