DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33098 and rlc1

DIOPT Version :10

Sequence 1:NP_788657.1 Gene:CG33098 / 326253 FlyBaseID:FBgn0053098 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_594364.1 Gene:rlc1 / 2543545 PomBaseID:SPAC926.03 Length:184 Species:Schizosaccharomyces pombe


Alignment Length:149 Identity:42/149 - (28%)
Similarity:75/149 - (50%) Gaps:8/149 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ELDIAKLAELKEVFSLFDTDCDGLISKDDLRFTYTALGNEPNEQLLEQMMQEAKEPLDYEAFVRL 141
            :|..:::.||||.|:|.|.|.||.|.::|::...|:|..:.:|..:..|.:....|::..||:..
pombe    41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESINPPINLAAFLTA 105

  Fly   142 MSRRTQELDPEDVLLEAWSKWDDHGTGKIDERKIYEELTNYGDKMTLNEAKEALSHAPMAKPKSL 206
            |......:.|.:.||||:|.:||..:|||....:.:.|::.||:|...|.:..|        :|.
pombe   106 MGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESIL--------RSY 162

  Fly   207 EEPPMIDYPAFCRMLSGMR 225
            ....:..|..|...::|.:
pombe   163 TSHGVFYYEKFVDAIAGSK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33098NP_788657.1 PTZ00184 75..221 CDD:185504 41/143 (29%)
rlc1NP_594364.1 PTZ00184 41..174 CDD:185504 40/140 (29%)

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