DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh2 and gabD

DIOPT Version :10

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_417147.1 Gene:gabD / 948060 ECOCYCID:EG11329 Length:482 Species:Escherichia coli


Alignment Length:454 Identity:98/454 - (21%)
Similarity:178/454 - (39%) Gaps:77/454 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 AIDKSVEAQVKWDKVRLSDRIDI---WERAAMLIAGRYRYNIIAATMLGQGKTLRQAEMDVAELV 184
            |||.:..|...|..:...:|..|   |....|    .::.::.....|.|||.|.:|:.:::...
E. coli    53 AIDAANRALPAWRALTAKERATILRNWFNLMM----EHQDDLARLMTLEQGKPLAEAKGEISYAA 113

  Fly   185 DFM--------RI-------NPVFLRELANYEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGI 234
            .|:        ||       :....|.:...:||                 |..|||:|:||...
E. coli   114 SFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPI-----------------GVTAAITPWNFPAA 161

  Fly   235 AANLAYTPAL-MGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKL 298
            .......||| .|.:::.||:.....|...:.:....||||.||.|.|........:.:|.:|.:
E. coli   162 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLV 226

  Fly   299 AGINFTGTSTVLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYA 363
            ..::|||::.:.:.|.:..|::|.      ::..|.||.....|...|:.:.||...:.:.|..|
E. coli   227 RKLSFTGSTEIGRQLMEQCAKDIK------KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNA 285

  Fly   364 GQKCSSCSMLYVPESLWQNHIREPLLEITASLVVRQD-------ATYCDSFCSAVINRRAYDRIY 421
            ||.|...:.|||.:.:: :...|.|.:..:.|.:...       ....|....|.:.....|.: 
E. coli   286 GQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADAL- 348

  Fly   422 MWLRYIDQSPSCQILVGGSCDKRRGYYVDPTVVLVKDLDNIICREELLAPILGVYVYPDHKLKET 486
                    ....:::.||...:|.|.:..||:::....:..:.:||...|:.     |..:.|:.
E. coli   349 --------EKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLA-----PLFRFKDE 400

  Fly   487 MEKVAQIN---HGLTGSVFAQDQNFIEEAYDAFRVNVGNLNVNDKSTGLMVGQ-QPFGAGHMTG 546
            .:.:||.|   .||....:|:|.:.:....:|....:..:|     ||::..: .|||....:|
E. coli   401 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGIN-----TGIISNEVAPFGGIKASG 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:448367 98/454 (22%)
gabDNP_417147.1 gabD 1..482 CDD:183050 98/454 (22%)

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