DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh2 and ALDH4A1

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_003739.2 Gene:ALDH4A1 / 8659 HGNCID:406 Length:563 Species:Homo sapiens


Alignment Length:535 Identity:257/535 - (48%)
Similarity:351/535 - (65%) Gaps:5/535 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VANEKLLQYDEGSKERTELETALLGVLNRVEHVPIVINGQEFQAKEDFQQVLPYDIQQPIAHYGH 114
            ||||.:|.:.:||.||..|:.||..:..|:|.:|.|:..:|....:...||.|::....:|.:.:
Human    32 VANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSPFNHGHKVAKFCY 96

  Fly   115 AHRVLIQMAIDKSVEAQVKWDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQAEMD 179
            |.:.|:..||:.::.|:.:||...::||..|:.:||.:::|..|..|:|.||:|||||:.|||:|
Human    97 ADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEID 161

  Fly   180 -VAELVDFMRINPVFLRELANYEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAYTPA 243
             .|||:||.|.|..:..||...:||....:.  ||...|||.||||||||||||.|..|||..||
Human   162 AAAELIDFFRFNAKYAVELEGQQPISVPPST--NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPA 224

  Fly   244 LMGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGTST 308
            ||||.|:|||||:|:|::|.|::.|||||:|..::.||||:...|...||....|.||||||:..
Human   225 LMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 289

  Fly   309 VLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCSML 373
            ..|.||:.||||::.:..:|||.||.|||||||||.||:.|:.|:.|:|:||||.|||||:||.|
Human   290 TFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRL 354

  Fly   374 YVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAVINRRAYDRIYMWLRYIDQSPSCQILVG 438
            |||.|||. .|:..|||..:.:.|...|....:|.||||:.:::.||..||.:...|||..||.|
Human   355 YVPHSLWP-QIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAG 418

  Fly   439 GSCDKRRGYYVDPTVVLVKDLDNIICREELLAPILGVYVYPDHKLKETMEKV-AQINHGLTGSVF 502
            |.||...||:|:|.:|..||....|.:||:..|:|.||||||.|.|||::.| :..::||||:||
Human   419 GKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVF 483

  Fly   503 AQDQNFIEEAYDAFRVNVGNLNVNDKSTGLMVGQQPFGAGHMTGTSDKLGTPHSLLRWTSPQVIK 567
            :||::.::||....|...||..:||||||.:|||||||....:||:||.|.||.:||||||||||
Human   484 SQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIK 548

  Fly   568 ESYKTHRNIFYPYMQ 582
            |::|...:..|.|||
Human   549 ETHKPLGDWSYAYMQ 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 252/521 (48%)
ALDH4A1NP_003739.2 ALDH_F4-17_P5CDH 32..553 CDD:143441 252/523 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159274
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S619
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D293592at33208
OrthoFinder 1 1.000 - - FOG0004722
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3320
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.660

Return to query results.
Submit another query.