DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh2 and P5CDh1

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster


Alignment Length:537 Identity:279/537 - (51%)
Similarity:375/537 - (69%) Gaps:4/537 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 DEMVANEKLLQYDEGSKERTELETALLGVLNRVEHVPIVINGQEFQAKEDFQQVLPYDIQQPIAH 111
            |..:|||.:|.|.:.||||..||.||.|..:..|.:||||.|:|::..|...||:|:|.|..:|.
  Fly    38 DFPIANEPILGYLKDSKERKALEQALKGTASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLAS 102

  Fly   112 YGHAHRVLIQMAIDKSVEAQVKWDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQA 176
            :.:|.:.||:.||..:||.|.|||:|.::||:.|||:||.|:|..||.::.|||||||.||..||
  Fly   103 FYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQA 167

  Fly   177 EMD-VAELVDFMRINPVFLRELANYEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAY 240
            |:| .|||:||:|:|..||:|:..|:||.:.....:||:|.||:.||:||:||||||.|..||:|
  Fly   168 EIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSY 232

  Fly   241 TPALMGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTG 305
            |||||||.|:|||||:|:|||:.:||.:|||||||||||||||:...|...:|..|.||||||||
  Fly   233 TPALMGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTG 297

  Fly   306 TSTVLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSC 370
            :......||:.|..||:.|.|:|||.||.|||||||:|:||:.|:.|..|||:||||.|||||:|
  Fly   298 SVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSAC 362

  Fly   371 SMLYVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAVINRRAYDRIYMWLRYIDQSPSCQI 435
            |.:|||||||. .|:|.|:...|.|.: .|.....||.||||:.:|:.||..::.:..:||:.:|
  Fly   363 SRMYVPESLWP-QIKEGLVCEAAKLKI-GDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEI 425

  Fly   436 LVGGSCDKRRGYYVDPTVVLVKDLDNIICREELLAPILGVYVYPDHKLKETMEKV-AQINHGLTG 499
            |.||:....:||:|:||:||.||..:.|..||:..|:|.:|||.:..|.|||:.| ......|||
  Fly   426 LAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTG 490

  Fly   500 SVFAQDQNFIEEAYDAFRVNVGNLNVNDKSTGLMVGQQPFGAGHMTGTSDKLGTPHSLLRWTSPQ 564
            :||.||::|::.|...|::..||..:||||||.:|||||||.|.|:||:||.|.||.:|||||||
  Fly   491 AVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAGGPHYILRWTSPQ 555

  Fly   565 VIKESYKTHRNIFYPYM 581
            .|||::...|::.||||
  Fly   556 SIKETFVPLRDVNYPYM 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 273/521 (52%)
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 273/523 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469345
Domainoid 1 1.000 421 1.000 Domainoid score I86
eggNOG 1 0.900 - - E1_COG1012
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 460 1.000 Inparanoid score I284
Isobase 1 0.950 - 0 Normalized mean entropy S619
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D293592at33208
OrthoFinder 1 1.000 - - FOG0004722
OrthoInspector 1 1.000 - - otm46911
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42862
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3320
1110.850

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