DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh2 and Aldh1l2

DIOPT Version :10

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001178707.2 Gene:Aldh1l2 / 299699 RGDID:1309458 Length:923 Species:Rattus norvegicus


Alignment Length:554 Identity:114/554 - (20%)
Similarity:212/554 - (38%) Gaps:93/554 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EKLLQYDEGSKERTELETALLGVLNRVEHVPIVINGQEFQAK--EDFQQVLPYDIQQPIAHYGHA 115
            |..|..|..|||..|:...:        .....||||...|:  |.:..:.|.| ...:....:|
  Rat   422 EAELVVDYVSKEVNEMTVKM--------PYQCFINGQFVDAEDGETYATINPTD-GTTLCRVSYA 477

  Fly   116 HRVLIQMAIDKSVEA--QVKWDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQAEM 178
            ....:..|:..:.:|  ..:|.::...||            ||..|.:  |.::.:    .|.|:
  Rat   478 SLADVDRAVAAAKDAFENGEWGRMNARDR------------GRLMYRL--ADLMEE----NQEEL 524

  Fly   179 DVAELVDFMRINPVFL-----------RELANYEPIRDIQNNCRNSMRLRGLSGF--------VA 224
            ...|.:|...:..:.|           |..|.:.....:.....|..|:....|.        .|
  Rat   525 ATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQVTKEPENQARIHDTLGMSSEEPKVVCA 589

  Fly   225 AISPFNFTGIAANLAYTPA---LMGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEET 286
            .|.|:|:.  ...||:..|   ..||:::.||:....|:.....:...:||.|.||:|.:|....
  Rat   590 IIIPWNYP--LMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIIPGSGG 652

  Fly   287 TFASVVTQHPKLAGINFTGTSTVLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETA 351
            .....::|||.:..:.|||:::|.|.:.:..|     ..|..::..|.|||:...:.|..|.:.|
  Rat   653 VAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCA-----VSNLKKVSLELGGKSPLIIFSDCELDKA 712

  Fly   352 VACTIRAAFEYAGQKCSSCSMLYVPESLWQNHIREPLLEITASLV---VRQDATYCDSFCSAVIN 413
            |...:.|.|...|:.|.:...|:|.|::....:...:.||....:   :.:...:...      |
  Rat   713 VRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQ------N 771

  Fly   414 RRAYDRIYMWLRYIDQ--SPSCQILVGGSCDKRRGYYVDPTVVLVKDLDNIICREELLAPILGVY 476
            .:|:  :...|:|.:.  .....::.||...:|.|::::|||....:....:.:||...||:.:.
  Rat   772 HKAH--LEKLLQYCETGVKEGATLVYGGRQVQRPGFFMEPTVFTGVEDHMYLAKEESFGPIMVIS 834

  Fly   477 VYPDHKLKETMEKVAQINHGLTGSVFAQDQN---FIEEAYDAFRVNVGNLNVNDKSTGLMVGQQP 538
            .:.:..:...:::.....:||...||.:|.:   ::.:..:|..|.:...|..|.:.       |
  Rat   835 KFQNGDIDGVLQRANNTEYGLASGVFTRDISKAMYVSDRLEAGTVFINTYNKTDVAA-------P 892

  Fly   539 FGAGHMTGTSDKLGTPHSLLRWTSPQVIKESYKT 572
            ||....:|....||          .:.:.|..||
  Rat   893 FGGVKQSGFGKDLG----------EEALNEYLKT 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:448367 112/550 (20%)
Aldh1l2NP_001178707.2 FMT_core_FDH_N 23..225 CDD:187716
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..>390 CDD:425746
ALDH_F1L_FTFDH 438..923 CDD:143458 107/538 (20%)
Blue background indicates that the domain is not in the aligned region.

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