DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh2 and Aldh2

DIOPT Version :10

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_115792.2 Gene:Aldh2 / 29539 RGDID:69219 Length:519 Species:Rattus norvegicus


Alignment Length:534 Identity:137/534 - (25%)
Similarity:214/534 - (40%) Gaps:115/534 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 IVINGQEFQA--KEDFQQVLPYDIQQPIAHYGHAHRVLIQMA------IDKSVEAQ-------VK 133
            |.||.:...|  |:.|..|.|           ....|:.|:|      :||:|:|.       ..
  Rat    41 IFINNEWHDAVSKKTFPTVNP-----------STGEVICQVAEGNKEDVDKAVKAARAAFQLGSP 94

  Fly   134 WDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQAEMDVAELVDF------------ 186
            |.::..|||..:..|.|.||. |.|..:.|...|..||     ...::.|||.            
  Rat    95 WRRMDASDRGRLLYRLADLIE-RDRTYLAALETLDNGK-----PYVISYLVDLDMVLKCLRYYAG 153

  Fly   187 ---------MRINPVFLRELANYEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAYTP 242
                     :.|:..|. ....:||:                 |....|.|:||..:.......|
  Rat   154 WADKYHGKTIPIDGDFF-SYTRHEPV-----------------GVCGQIIPWNFPLLMQAWKLGP 200

  Fly   243 AL-MGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGT 306
            || .||.|:.|.::...|:..:|...::|||.|.||||.||....|..:.:..|..:..:.||| 
  Rat   201 ALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG- 264

  Fly   307 STVLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCS 371
            ||.:..|.|:.|.:    .|..|:..|.|||:.:.:.|.|:.:.||.....|.|...||.|.:.|
  Rat   265 STEVGHLIQVAAGS----SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGS 325

  Fly   372 MLYVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAV-----INRRAYDRIYMWLRYI--DQ 429
            ..:|.|.::...:...:....:.:|       .:.|.|..     ::...:.:|   |.||  .|
  Rat   326 RTFVQEDVYDEFVERSVARAKSRVV-------GNPFDSRTEQGPQVDETQFKKI---LGYIKSGQ 380

  Fly   430 SPSCQILVGGSCDKRRGYYVDPTVV-LVKDLDNIICREELLAPILGVYVYPDHKLKETMEKVAQI 493
            ....::|.||.....|||::.|||. .||| ...|.:||:..|::.:.     |.|...|.|.:.
  Rat   381 QEGAKLLCGGGAAADRGYFIQPTVFGDVKD-GMTIAKEEIFGPVMQIL-----KFKTIEEVVGRA 439

  Fly   494 N---HGLTGSVFAQD---QNFIEEAYDAFRVNVGNLNVNDKSTGLMVGQQPFGAGHMTGTSDKLG 552
            |   :||..:||.:|   .|::.:|..|..|.:...:|       ...|.|||...|:|:..:||
  Rat   440 NNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDV-------FGAQSPFGGYKMSGSGRELG 497

  Fly   553 TPHSLLRWTSPQVI 566
             .:.|..:|..:.:
  Rat   498 -EYGLQAYTEVKTV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:448367 137/534 (26%)
Aldh2NP_115792.2 SIFI-degron. /evidence=ECO:0000250|UniProtKB:P05091 12..26
ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 137/534 (26%)
Blue background indicates that the domain is not in the aligned region.

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