DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh2 and Aldh2

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_115792.2 Gene:Aldh2 / 29539 RGDID:69219 Length:519 Species:Rattus norvegicus


Alignment Length:534 Identity:137/534 - (25%)
Similarity:214/534 - (40%) Gaps:115/534 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 IVINGQEFQA--KEDFQQVLPYDIQQPIAHYGHAHRVLIQMA------IDKSVEAQ-------VK 133
            |.||.:...|  |:.|..|.|           ....|:.|:|      :||:|:|.       ..
  Rat    41 IFINNEWHDAVSKKTFPTVNP-----------STGEVICQVAEGNKEDVDKAVKAARAAFQLGSP 94

  Fly   134 WDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQAEMDVAELVDF------------ 186
            |.::..|||..:..|.|.||. |.|..:.|...|..||     ...::.|||.            
  Rat    95 WRRMDASDRGRLLYRLADLIE-RDRTYLAALETLDNGK-----PYVISYLVDLDMVLKCLRYYAG 153

  Fly   187 ---------MRINPVFLRELANYEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAYTP 242
                     :.|:..|. ....:||:                 |....|.|:||..:.......|
  Rat   154 WADKYHGKTIPIDGDFF-SYTRHEPV-----------------GVCGQIIPWNFPLLMQAWKLGP 200

  Fly   243 AL-MGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGT 306
            || .||.|:.|.::...|:..:|...::|||.|.||||.||....|..:.:..|..:..:.||| 
  Rat   201 ALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG- 264

  Fly   307 STVLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCS 371
            ||.:..|.|:.|.:    .|..|:..|.|||:.:.:.|.|:.:.||.....|.|...||.|.:.|
  Rat   265 STEVGHLIQVAAGS----SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGS 325

  Fly   372 MLYVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAV-----INRRAYDRIYMWLRYI--DQ 429
            ..:|.|.::...:...:....:.:|       .:.|.|..     ::...:.:|   |.||  .|
  Rat   326 RTFVQEDVYDEFVERSVARAKSRVV-------GNPFDSRTEQGPQVDETQFKKI---LGYIKSGQ 380

  Fly   430 SPSCQILVGGSCDKRRGYYVDPTVV-LVKDLDNIICREELLAPILGVYVYPDHKLKETMEKVAQI 493
            ....::|.||.....|||::.|||. .||| ...|.:||:..|::.:.     |.|...|.|.:.
  Rat   381 QEGAKLLCGGGAAADRGYFIQPTVFGDVKD-GMTIAKEEIFGPVMQIL-----KFKTIEEVVGRA 439

  Fly   494 N---HGLTGSVFAQD---QNFIEEAYDAFRVNVGNLNVNDKSTGLMVGQQPFGAGHMTGTSDKLG 552
            |   :||..:||.:|   .|::.:|..|..|.:...:|       ...|.|||...|:|:..:||
  Rat   440 NNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDV-------FGAQSPFGGYKMSGSGRELG 497

  Fly   553 TPHSLLRWTSPQVI 566
             .:.|..:|..:.:
  Rat   498 -EYGLQAYTEVKTV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 137/534 (26%)
Aldh2NP_115792.2 ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 137/534 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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