DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh2 and alh-2

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_503467.2 Gene:alh-2 / 187001 WormBaseID:WBGene00000108 Length:514 Species:Caenorhabditis elegans


Alignment Length:514 Identity:121/514 - (23%)
Similarity:220/514 - (42%) Gaps:67/514 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 EHVPIVINGQEFQAK--EDFQQVLPYDIQQPIAHYGHAHRVLIQMAID---KSVEAQVKWDKVRL 139
            ::..:.||.:...||  :.|:.|.|.: .:.:|.....:|..:.:|::   |:.:...:|.::..
 Worm    32 KYTSLFINNEFVDAKSGKTFEFVNPAN-GKLLAKVAEGNRDDVDIAVEAAKKAFKIGSEWRRMDA 95

  Fly   140 SDRIDIWERAAMLIAGRYRYNIIAATM--LGQGKTLRQA-EMDVAELVDFMRINPVFLRELANYE 201
            |.|..:..|.|.|:.   |..:|.|::  |..||..::| .:|:          |:.::....|.
 Worm    96 SHRGVLLNRLADLME---RDRVILASLESLDNGKPYKEAYNIDL----------PISIKTFRYYA 147

  Fly   202 PIRDIQNNCRNSMRLRG---------LSGFVAAISPFNFTGIAANLAYTPAL-MGNSVIWKPSDS 256
            ...|  .|...::.:.|         ..|....|.|:||..:.......||| |||:|:.|.:..
 Worm   148 GYAD--KNHGKTIPVGGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLAPALAMGNTVVMKVAVK 210

  Fly   257 AILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGTSTVLKVLWQLVAQNI 321
            ..||...|...::||..|:||||.:|...|.....:..|..:..:.|||::.|.|.:.:..|:: 
 Worm   211 TPLSALHVASLIKEAQFPEGVVNIIPGRGTDAGEAIASHMDVDKVAFTGSTEVGKTIMKAAAES- 274

  Fly   322 NFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCSMLYVPESLWQNHIRE 386
                |..::..|.|||:.:.|.:.|:.|.||..:..|.|...||.||:.|..:|...::...:.:
 Worm   275 ----NVKKVTLELGGKSPNIVFADADLEEAVRQSHHALFFNQGQCCSAGSRTFVEGKIYDEFVAK 335

  Fly   387 PLLEITASLVVRQDATYCDSFCSAVINRRAYD--RIYMWLRYID--QSPSCQILVGGSCDKRRGY 447
             ..|:....|:.      |.|..........|  ::...::||:  :....|::.||.....:||
 Worm   336 -AKELVEKTVIG------DPFDENTTQGPQIDESQVETIMKYIESGKKEGAQLVTGGVKHGDQGY 393

  Fly   448 YVDPTVVLVKDLDNIICREELLAPILGVYVYPDHKLKETMEKVAQINHGLTGSVFAQDQNFIEEA 512
            :|.||:....:....|.:||:..|::.|..:  ..::|.:||.....:||...|...|.|...:.
 Worm   394 FVKPTIFANVNDQMKIAQEEIFGPVMIVIRF--DSMEELIEKANNTIYGLAAGVVTNDLNKALQV 456

  Fly   513 YDAFRVNVGNLNVN-----DKSTGLMVGQQPFGAGHMTGTSDKLGTPHSLLRWTSPQVI 566
            .:..|  .|::.||     |.:.       |||....:|...:|| .:.|..:|..:.:
 Worm   457 ANTIR--AGSVWVNCYDVFDPAA-------PFGGFKQSGIGRELG-EYGLAAYTEVKTV 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 121/514 (24%)
alh-2NP_503467.2 ALDH_F1-2_Ald2-like 34..507 CDD:143410 121/512 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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