DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh2 and alh-11

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001379574.1 Gene:alh-11 / 185679 WormBaseID:WBGene00000117 Length:687 Species:Caenorhabditis elegans


Alignment Length:589 Identity:135/589 - (22%)
Similarity:240/589 - (40%) Gaps:119/589 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PR--LEASVKGGLVSVRS--TSKRPELSEHFTLDEMVANEKLLQYDEGSKERTELETALLGVLNR 78
            ||  |:..:...|:::.|  .:|..|||.||                                  
 Worm   179 PRLLLKMRIFPNLINLNSLTETKLLELSSHF---------------------------------- 209

  Fly    79 VEHVPIVINGQEFQAKEDFQQVLPYDIQQPIAHYGHAHRVLIQMAIDKSVEAQVKWDKVRLSDRI 143
                 :..|..||.:...|:.:.|.. .:|:|.:.:|.|..:.:.:.::.:||.:|.|....:|.
 Worm   210 -----VAGNHVEFPSDRKFEVIEPRS-GKPMATWHYATRDQVDLTVKEAKKAQKQWAKSSWMERS 268

  Fly   144 DIWERAAMLIAGRYRYNIIAA-TMLGQGKTLRQAEMDVAELVD-FMRINPVFLRELANYEPIRDI 206
            :|.::...|:  :...|.||. ..:..||.:.:|:.||...|| |...:.:....|..:.|:   
 Worm   269 EILKKTGDLL--KTHCNDIAYWECISNGKPIAEAKADVLSCVDTFYFYSGIASDLLGQHVPL--- 328

  Fly   207 QNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAYTPAL-MGNSVIWKPSDSAILSNYFVFKALRE 270
             :..|.:...|...|.||||..:|:.....:....||| .||:||:|||..:.::...:.:.|:.
 Worm   329 -DASRYAYTRRLPVGVVAAIGAWNYPIQTCSWKTAPALACGNAVIYKPSPLSPVTALILAEILKS 392

  Fly   271 AGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGTSTVLKVLWQLVAQNINFYQNYPRLVGEGG 335
            ||:||||.|.:..:..| |..:..|..::.::|||:....|.:.:..|.     :|...:..|.|
 Worm   393 AGLPDGVFNVIQGDAET-AQDLIHHDGVSKVSFTGSIPTGKKIMKACAD-----RNIKPVTLELG 451

  Fly   336 GKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCSMLYVPESLWQ-------NH-----IREPL 388
            ||:...|...|:.::||:|.:.|.|...||.||:.|.:.|.:|:.:       :|     |.:||
 Worm   452 GKSALIVFDDADIDSAVSCAMMANFYSQGQVCSNASKVLVHKSVLKEFTKKLVDHTQKMKIGDPL 516

  Fly   389 LEIT--ASLVVRQDATYCDSFCSAVINRRAYDRIYMWLRYIDQSPSCQILVGGSCDK------RR 445
            .|.|  .|.:..:.....:.:.|..|...|..                 |.||  |:      ..
 Worm   517 KEDTQVGSHISAEHRNKVEGYISTAIAEGATK-----------------LCGG--DRVAVHGLEN 562

  Fly   446 GYYVDPTVVLVKDLDNIICREELLAPILGVYVYPDHKLKETMEKVAQINHGLTGSVFAQDQNFIE 510
            |:|:.|.::........:.|||:...:|  .:.|.....|.::.....:.||...:..:|   :.
 Worm   563 GFYLSPCILTGITPKMTVYREEIFGSVL--LIIPFDTEDEAIKIANDTDMGLAAGLVTKD---LS 622

  Fly   511 EAYD-AFRVNVGNLNVND-KSTGLMVGQQPFGAGHMTGTSDKLGTPHSLLRWTSPQVIKESYKTH 573
            .:|. :.::|.||:.||. .....:|   |||....:|...:.||           .:.|.|...
 Worm   623 RSYRVSEQLNAGNVYVNTYNDVSPLV---PFGGVGESGFGRENGT-----------AVLEHYTHL 673

  Fly   574 RNIF 577
            :::|
 Worm   674 KSVF 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 122/544 (22%)
alh-11NP_001379574.1 NLPC_P60 <30..131 CDD:419716
ALDH_F9_TMBADH 225..681 CDD:143409 120/504 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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