DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh2 and alh-10

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_509203.1 Gene:alh-10 / 180979 WormBaseID:WBGene00000116 Length:506 Species:Caenorhabditis elegans


Alignment Length:508 Identity:115/508 - (22%)
Similarity:209/508 - (41%) Gaps:61/508 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RTELETALLGVLN--RVEHVPIV-INGQEFQAKEDFQQVLPYDIQQPIAHYGHAHRVLIQMAIDK 126
            |.|.:..|..:::  ..:|.|:. ..|.||...|.....:.....:|...........:..|::.
 Worm     7 REEFKNILQKLIDSPNEQHDPLTNFIGNEFARSEKLMDSVNPSTGKPWIKIPDGTAREVDQAVEA 71

  Fly   127 SVEAQVKWDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQAEMDVAELVDFMRINP 191
            :.||...|.|..:..|..:..:.|.||. .:..:|.......|||.:     .:|:::|..|...
 Worm    72 AKEAFKTWKKTTVQQRSALLNKVANLIE-EFNDDIAILESRDQGKPI-----GLAKVMDIPRCVQ 130

  Fly   192 VFLRELAN------------YEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAYTPAL 244
            .| |:.||            .:|.....|..:|..     .|....|||:|......:....|||
 Worm   131 NF-RDFANAALYSLSTSTILEQPTGKFVNYVKNDP-----VGVAGLISPWNLPLYLLSFKLAPAL 189

  Fly   245 M-GNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGTST 308
            : ||:|:.|||:...::.:.:..|.:..|.|.||||.|..|..:....:..|..:..|:||| ||
 Worm   190 VAGNTVVCKPSEMTSVTAWVLMHAFKLVGFPPGVVNMVIGEGKSAGQRLVDHVDVPLISFTG-ST 253

  Fly   309 VLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCSML 373
            |:....|.....:|     .::..|.||||...|:|:.. ::.:|...|::|...|:.|...|.|
 Worm   254 VIGKKIQEDGAKLN-----KKVSLEMGGKNPGIVYSNYR-KSDIASIARSSFLNQGEICLCTSRL 312

  Fly   374 YVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAVINRRAYDRIYMWLRYIDQSPSCQILVG 438
            :|.:.::.:.::. .:|......|....|...  ..|:.::..|:::..::. :.:.....||.|
 Worm   313 FVQKPIFADFVKS-YVEEAKKFTVGDPTTQVQ--IGAMNSKVHYEKVKSYIE-LAKKEGADILCG 373

  Fly   439 G------SCDKRRGYYVDPTVVL-VKDLDNIICREELLAPILGVYVYPDHKLKETMEKVAQINHG 496
            |      .|:  .||::.|||:: :.|...:: .:|:..|:  |.:.|....:|.:|:.....:|
 Worm   374 GVTTIQNGCE--NGYFITPTVIVGLHDASKVM-TDEIFGPV--VCITPFDTAEEVIERANSTPYG 433

  Fly   497 LTGSVFAQDQNFIEEAYDAFRVNVGNLN---VNDKSTGLMVGQQPFGAGHMTG 546
            |:.:|::.|.:.:....:..|......|   ..|.|       .|||....:|
 Worm   434 LSATVWSSDSDELLNTANELRAGTVWCNTWLARDLS-------MPFGGCKQSG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 115/508 (23%)
alh-10NP_509203.1 ALDH_F8_HMSADH 45..500 CDD:143412 106/470 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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