DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh2 and Aldh2

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_033786.1 Gene:Aldh2 / 11669 MGIID:99600 Length:519 Species:Mus musculus


Alignment Length:556 Identity:140/556 - (25%)
Similarity:220/556 - (39%) Gaps:121/556 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LETALLGVLNRVEHVP------IVINGQEFQA--KEDFQQVLPYDIQQPIAHYGHAHRVLIQMA- 123
            |..|....:....|.|      |.||.:...|  ::.|..|.|           ....|:.|:| 
Mouse    19 LSAAATSAVPAPNHQPEVFCNQIFINNEWHDAVSRKTFPTVNP-----------STGEVICQVAE 72

  Fly   124 -----IDKSVEAQ-------VKWDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQA 176
                 :||:|:|.       ..|.::..|||..:..|.|.||. |.|..:.|...|..||     
Mouse    73 GNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIE-RDRTYLAALETLDNGK----- 131

  Fly   177 EMDVAELVDF---------------------MRINPVFLRELANYEPIRDIQNNCRNSMRLRGLS 220
            ...::.|||.                     :.|:..|. ....:||:                 
Mouse   132 PYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFF-SYTRHEPV----------------- 178

  Fly   221 GFVAAISPFNFTGIAANLAYTPAL-MGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAE 284
            |....|.|:||..:.......||| .||.|:.|.::...|:..:|...::|||.|.||||.||..
Mouse   179 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGF 243

  Fly   285 ETTFASVVTQHPKLAGINFTGTSTVLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPE 349
            ..|..:.:..|..:..:.||| ||.:..|.|:.|.:    .|..|:..|.|||:.:.:.|.|:.:
Mouse   244 GPTAGAAIASHEGVDKVAFTG-STEVGHLIQVAAGS----SNLKRVTLELGGKSPNIIMSDADMD 303

  Fly   350 TAVACTIRAAFEYAGQKCSSCSMLYVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAV--- 411
            .||.....|.|...||.|.:.|..:|.|:::...:...:....:.:|       .:.|.|..   
Mouse   304 WAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVV-------GNPFDSRTEQG 361

  Fly   412 --INRRAYDRIYMWLRYI--DQSPSCQILVGGSCDKRRGYYVDPTVV-LVKDLDNIICREELLAP 471
              ::...:.:|   |.||  .|....::|.||.....|||::.|||. .||| ...|.:||:..|
Mouse   362 PQVDETQFKKI---LGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKD-GMTIAKEEIFGP 422

  Fly   472 ILGVYVYPDHKLKETMEKVAQIN---HGLTGSVFAQD---QNFIEEAYDAFRVNVGNLNVNDKST 530
            ::.:.     |.|...|.|.:.|   :||..:||.:|   .|::.:|..|..|.:...:|     
Mouse   423 VMQIL-----KFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDV----- 477

  Fly   531 GLMVGQQPFGAGHMTGTSDKLGTPHSLLRWTSPQVI 566
              ...|.|||...|:|:..:|| .:.|..:|..:.:
Mouse   478 --FGAQSPFGGYKMSGSGRELG-EYGLQAYTEVKTV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 140/556 (25%)
Aldh2NP_033786.1 PLN02466 3..518 CDD:215259 140/556 (25%)
ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 137/542 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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