DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh2 and aldh4a1

DIOPT Version :9

Sequence 1:NP_788705.1 Gene:P5CDh2 / 32625 FlyBaseID:FBgn0053092 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001096184.1 Gene:aldh4a1 / 100124732 XenbaseID:XB-GENE-959460 Length:556 Species:Xenopus tropicalis


Alignment Length:535 Identity:256/535 - (47%)
Similarity:342/535 - (63%) Gaps:5/535 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VANEKLLQYDEGSKERTELETALLGVLNRVEHVPIVINGQEFQAKEDFQQVLPYDIQQPIAHYGH 114
            |.||.:|::..||.||..|:.||..:....|.:|.|:.|:|...|:...||.|:.....:|.|.:
 Frog    25 VKNEPILEFRSGSAERAALQQALHELKATTEEIPCVVGGEEVWTKDVRYQVSPFKHSHRVAKYCY 89

  Fly   115 AHRVLIQMAIDKSVEAQVKWDKVRLSDRIDIWERAAMLIAGRYRYNIIAATMLGQGKTLRQAEMD 179
            |.:.|:..||:.::..:.:||...:.||..|:.:||.|::|..|..|:|.||:|||||..|||:|
 Frog    90 ADKELLNKAINAAMGVRKEWDLKPVQDRAQIFFKAADLLSGPRRAEILAKTMIGQGKTAIQAEID 154

  Fly   180 -VAELVDFMRINPVFLRELANYEPIRDIQNNCRNSMRLRGLSGFVAAISPFNFTGIAANLAYTPA 243
             .|||:||.|.|..:..||.:.:||....:.  |||..|||.||:||:||||||.|..|||..||
 Frog   155 AAAELIDFFRFNAKYALELTHEQPISIPVST--NSMVYRGLEGFIAAVSPFNFTAIGGNLAGAPA 217

  Fly   244 LMGNSVIWKPSDSAILSNYFVFKALREAGVPDGVVNFVPAEETTFASVVTQHPKLAGINFTGTST 308
            ||||.|:|||||:||||:|.|:|.|.|||:|..|:.||||:...|...:|....|.||||||:..
 Frog   218 LMGNVVLWKPSDTAILSSYAVYKVLLEAGLPPNVIQFVPADGPVFGDTITSSEHLCGINFTGSVP 282

  Fly   309 VLKVLWQLVAQNINFYQNYPRLVGEGGGKNFHFVHSSAEPETAVACTIRAAFEYAGQKCSSCSML 373
            ..|.||:.||||::.|:.:|||.||.|||||||||:||:.|:.|..|||:||||.|||||:||.|
 Frog   283 TFKHLWKQVAQNLDVYRTFPRLAGECGGKNFHFVHASADVESTVNGTIRSAFEYGGQKCSACSRL 347

  Fly   374 YVPESLWQNHIREPLLEITASLVVRQDATYCDSFCSAVINRRAYDRIYMWLRYIDQSPSCQILVG 438
            |||:|||. .|:..|||..|.:.|...|....||.||||:::::.||..|:.:...||...||.|
 Frog   348 YVPDSLWP-RIKARLLEEHAKIKVGDPADDFSSFFSAVIDQKSFRRIQGWISHAQSSPDLAILAG 411

  Fly   439 GSCDKRRGYYVDPTVVLVKDLDNIICREELLAPILGVYVYPDHKLKETMEKVAQIN-HGLTGSVF 502
            |.||...||||.||::..|:....|..||:..|:|.|||||:...:|.::.:...: :||||:||
 Frog   412 GKCDDSEGYYVQPTIIESKNPKEKIMAEEIFGPVLAVYVYPESNYREVLQLIDSTSPYGLTGAVF 476

  Fly   503 AQDQNFIEEAYDAFRVNVGNLNVNDKSTGLMVGQQPFGAGHMTGTSDKLGTPHSLLRWTSPQVIK 567
            |||:|.:.||....|...||..:||||||.:|.|||||....:||:||.|.||.:||||||||:|
 Frog   477 AQDKNVLREATQILRHAAGNFYINDKSTGAVVAQQPFGGSRASGTNDKPGWPHYILRWTSPQVVK 541

  Fly   568 ESYKTHRNIFYPYMQ 582
            |::.......|||||
 Frog   542 ETHVPLTEWKYPYMQ 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh2NP_788705.1 ALDH-SF 50..570 CDD:299846 251/521 (48%)
aldh4a1NP_001096184.1 ALDH_F4-17_P5CDH 25..546 CDD:143441 251/523 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D293592at33208
OrthoFinder 1 1.000 - - FOG0004722
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3320
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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