DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gorab and Gorab

DIOPT Version :9

Sequence 1:NP_788523.1 Gene:Gorab / 326245 FlyBaseID:FBgn0053052 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_849214.2 Gene:Gorab / 98376 MGIID:2138271 Length:368 Species:Mus musculus


Alignment Length:343 Identity:95/343 - (27%)
Similarity:168/343 - (48%) Gaps:66/343 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEKFNGFSHDEILKITGVKEGGVGKRPASLEAAKPALRIQPGIRRMPDKIFRQADQLRKQQQQQ 65
            |.:.:.|||.:|:.::...|:                 ..:|. ||:|.|..||..|..|...:|
Mouse     1 MAQDWAGFSEEELRRLKQNKD-----------------PFEPQ-RRIPVKKTRQQLQREKALLEQ 47

  Fly    66 PQQPIQKPDVAKKTKSGTATPTEKPPTPTPAAEDDVANGSLNLDRPLSDSLIEALYHGNATARDK 130
            .|            |.|                  :.:||.:|   |.:.|:.|... .|.::..
Mouse    48 SQ------------KLG------------------LQDGSASL---LPEQLLSAPKQ-RANSQKP 78

  Fly   131 KTPATYADAETTSTDDSSILKISGGDSQT----TSSTDDGSILPSTQDTSPRERLNTDSPFKGIS 191
            ::|:..|.:..|.|..|...|:.|..||.    ..::..|.  .|.:..:|:.....:.  |.:.
Mouse    79 RSPSPVAPSPLTPTSSSGDGKLPGVGSQPQEPGLENSHHGH--KSAEVRAPKPDCKVEK--KKME 139

  Fly   192 LKD------FEQHRRMIEEQNKQKKQMLYQAIEQHTQKTAAESRKIEEIRHELSKLESDLAVDVA 250
            |::      .:|.:|::||:||:||.:|.|||.:.::||.||:.|::.|:.||..|:..::.|:.
Mouse   140 LQEKSRWEVLQQEQRLMEEKNKRKKALLAQAIAERSKKTQAETIKLKRIQKELQALDDMVSADIG 204

  Fly   251 LLRKQIDNACIHFANVEKQYVKIEAQFLRAKIELHNASEKKELLTEHLCTVIAHNEDRKAQKLTE 315
            :||.:||.|.:.::...|::.:.||:::.||::|...:|.||.|||||||:|..||.|||:||.|
Mouse   205 ILRNRIDQASLEYSYARKRFDRAEAEYITAKLDLQRKTETKEQLTEHLCTIIQQNELRKAKKLEE 269

  Fly   316 LMQKVGLSPTDDCQPIDL 333
            |||::.:...::...:::
Mouse   270 LMQQLDVQADEEALQLEV 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GorabNP_788523.1 Transcrip_act <200..316 CDD:309879 50/115 (43%)
GorabNP_849214.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 6/41 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..133 13/77 (17%)
Transcrip_act <154..275 CDD:282763 36/130 (28%)
Necessary for interaction with RCHY1. /evidence=ECO:0000250 188..368 57/152 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..368 12/32 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836789
Domainoid 1 1.000 115 1.000 Domainoid score I6027
eggNOG 1 0.900 - - E1_28Z6D
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4721
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007411
OrthoInspector 1 1.000 - - oto92391
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21470
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5201
SonicParanoid 1 1.000 - - X5537
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.880

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