DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gorab and AT5G03660

DIOPT Version :9

Sequence 1:NP_788523.1 Gene:Gorab / 326245 FlyBaseID:FBgn0053052 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_568126.1 Gene:AT5G03660 / 831768 AraportID:AT5G03660 Length:173 Species:Arabidopsis thaliana


Alignment Length:171 Identity:40/171 - (23%)
Similarity:78/171 - (45%) Gaps:13/171 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 TDDGSILPSTQDTSPRERLNTDSPFKG--------ISLKDFEQHRRMIEEQNKQKKQMLYQAIEQ 219
            |:.....||.|....:::|:....|..        :|:|.....:.. ||:.::||..:.:.::.
plant     4 TETSQPAPSDQGRRLKDQLSESMSFSSQMKKEDDELSMKALSAFKAK-EEEIEKKKMEIRERVQA 67

  Fly   220 HTQKTAAESRKIEEIRHELSKLESDLAVDVALLRKQIDNACIHFANVEKQYVKIEAQFLRAKIEL 284
            ...:...||:::..||.||......:..:|.::||:||:.......:.....|.|.::..| :|.
plant    68 QLGRVEDESKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQKKETEYKDA-LEA 131

  Fly   285 HNA--SEKKELLTEHLCTVIAHNEDRKAQKLTELMQKVGLS 323
            .|.  .||.||:|: |..:...:|..:.:||.||.:.:.|:
plant   132 FNEKNKEKVELITK-LQELEGESEKFRFKKLEELSKNIDLT 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GorabNP_788523.1 Transcrip_act <200..316 CDD:309879 29/117 (25%)
AT5G03660NP_568126.1 Transcrip_act 21..169 CDD:398553 35/150 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_124332
Panther 1 1.100 - - O PTHR21470
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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