DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gorab and AT2G36410

DIOPT Version :9

Sequence 1:NP_788523.1 Gene:Gorab / 326245 FlyBaseID:FBgn0053052 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_565846.1 Gene:AT2G36410 / 818215 AraportID:AT2G36410 Length:195 Species:Arabidopsis thaliana


Alignment Length:192 Identity:43/192 - (22%)
Similarity:88/192 - (45%) Gaps:31/192 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 TTSSTDDG----------SILPSTQ---DTSPRER-----LNTDS-PFKG-ISLKDFEQHR---- 199
            |.|.|:||          |:.|..|   ...|:::     |:|.| .|.. :|.:|.|..|    
plant     2 TQSQTNDGAGAGAVTTVESVPPQPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALS 66

  Fly   200 --RMIEEQNKQKKQMLYQAIEQHTQKTAAESRKIEEIRHELSKLESDLAVDVALLRKQIDNACIH 262
              |..|::.::::..:.:.|:....:...|::::..||.||..:...:..:|:::||:||:....
plant    67 AFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKE 131

  Fly   263 FANVEKQYVKIEAQFLRAKIELHNAS--EKKELLTE--HLCTVIAHNEDRKAQKLTELMQKV 320
            ...:.....|.|.::..| ::..|..  ||.:|:|:  .:..::..:|..:..||.||.:.:
plant   132 LKPLGSTVQKKEREYKEA-LDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSI 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GorabNP_788523.1 Transcrip_act <200..316 CDD:309879 24/119 (20%)
AT2G36410NP_565846.1 Transcrip_act 41..194 CDD:398553 34/153 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_124332
Panther 1 1.100 - - O PTHR21470
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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