DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gorab and AT2G27740

DIOPT Version :9

Sequence 1:NP_788523.1 Gene:Gorab / 326245 FlyBaseID:FBgn0053052 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_180342.1 Gene:AT2G27740 / 817320 AraportID:AT2G27740 Length:174 Species:Arabidopsis thaliana


Alignment Length:175 Identity:41/175 - (23%)
Similarity:76/175 - (43%) Gaps:22/175 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 LKISGGDSQTTSSTDDGSILPSTQDTSPRERLNTDSPFKGISLKDFEQHRRMIEEQNKQKKQMLY 214
            :|.||..|...|...|           .:|...:.|.|.....|:.|..||.:|.:::.:|::  
plant    19 IKSSGNISMNGSPMID-----------EKEEELSQSAFALFKAKEDEIERRKMEVKDRVQKKL-- 70

  Fly   215 QAIEQHTQKTAAESRKIEEIRHELSKLESDLAVDVALLRKQIDNACIHFANVEKQYVKIEAQFLR 279
            ...|:.|       |::.|||.||..|...:..:::.:||::|........:.:...:.|.:|..
plant    71 GLAEEAT-------RRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLGQSCQRKEREFKE 128

  Fly   280 AKIELHNASEK-KELLTEHLCTVIAHNEDRKAQKLTELMQKVGLS 323
            | :|.:|...| |.:....|..::..:|..:..||.||.:.:.:|
plant   129 A-LEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIEIS 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GorabNP_788523.1 Transcrip_act <200..316 CDD:309879 26/116 (22%)
AT2G27740NP_180342.1 Transcrip_act 19..170 CDD:282763 40/171 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_124332
Panther 1 1.100 - - LDO PTHR21470
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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