DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gorab and gorab

DIOPT Version :9

Sequence 1:NP_788523.1 Gene:Gorab / 326245 FlyBaseID:FBgn0053052 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_956679.1 Gene:gorab / 393356 ZFINID:ZDB-GENE-040426-1384 Length:336 Species:Danio rerio


Alignment Length:358 Identity:92/358 - (25%)
Similarity:161/358 - (44%) Gaps:103/358 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GFSHDEILKITGVKEGGVGKRPASLEAAKPALRIQPGIRRMPDKIFRQADQLRKQQQQQ------ 65
            |||.:|:.|:   :..|        |.|..|:.:..|..|.|.:..|...||::::..|      
Zfish     6 GFSEEELRKL---QHNG--------EVANQAVSVTLGRGRKPAQTNRSRQQLQRERALQLAAKQK 59

  Fly    66 -------PQQPIQKPDVAKKTKSGTATPTEKPPT---PTPAAEDDVANGSLNLDRPLSDSLIEAL 120
                   |.|.:.:|              .:||.   |.|.||                      
Zfish    60 EISQSLLPDQQLTRP--------------PEPPASSHPAPPAE---------------------- 88

  Fly   121 YHGNATARDKKTPATYADAETTSTDDSSILKISGGDSQTTSSTDDGSILPS------TQDTSPRE 179
                 |..::..|..: :||....|.:|.::               ||.|:      .|:...||
Zfish    89 -----TPDEQSVPVKH-EAEPVKPDPASPVQ---------------SIPPADFKELDKQEVELRE 132

  Fly   180 RLNTDSPFKGISLKDFEQHRRMIEEQNKQKKQMLYQAIEQHTQKTAAESRKIEEIRHELSKLESD 244
            :..         |:..:..:|::||:||::|.:|.:.|.:.:::|.||:.|:::|:.||..|:..
Zfish   133 KNR---------LQQLQWEQRIMEEKNKKRKALLTKTIAEKSKQTQAEAIKLKKIQRELQVLDDS 188

  Fly   245 LAVDVALLRKQIDNACIHFANVEKQYVKIEAQFLRAKIELHNASEKKELLTEHLCTVIAHNEDRK 309
            ::.|:.:|||.|:.:.:.::...|::.|.||:::.||::||..:|.||.||||||.:|..||.||
Zfish   189 VSSDIGVLRKLIEQSSMDYSLAWKRFEKAEAEYVAAKMDLHRKTEVKEQLTEHLCAIIQQNELRK 253

  Fly   310 AQKLTELMQKVGLS----PTDDCQPIDLTQQSP 338
            |:||.|||.::.|:    |:.|...:...|:.|
Zfish   254 ARKLEELMLQLELNAEEVPSPDQTQLQDKQKEP 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GorabNP_788523.1 Transcrip_act <200..316 CDD:309879 46/115 (40%)
gorabNP_956679.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..118 24/148 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..336 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580286
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28Z6D
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1277705at2759
OrthoFinder 1 1.000 - - FOG0007411
OrthoInspector 1 1.000 - - oto41186
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21470
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5201
SonicParanoid 1 1.000 - - X5537
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.840

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