DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2B-14D and ppef1

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_021335306.1 Gene:ppef1 / 559132 ZFINID:ZDB-GENE-080303-27 Length:729 Species:Danio rerio


Alignment Length:534 Identity:125/534 - (23%)
Similarity:199/534 - (37%) Gaps:167/534 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 KQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEA----PVTVCGDIHGQFYDLMKLFEVGGS 173
            |:...|.|:.    .|:::.:....|:|...:|.:..    .:|:|||:||:..||:.:|...|.
Zfish   146 KEEQTLHGKY----VLQLLYETKKFLKQMPNVIYLSTSYAKEITICGDLHGRLDDLLLIFYKNGL 206

  Fly   174 P-ASTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY- 236
            | |...|:|.||:||||..|.|.::.|::..:.||..:.|.|||||...:...:.|.:|...|| 
Zfish   207 PSAENPYIFNGDFVDRGKKSTEIIIILFAFVLLYPDHMHLNRGNHEDHIMNLRYGFTREVMQKYK 271

  Fly   237 --SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSP----------EIHELEDIRR--------- 280
              ...:.....|.|..||:|.:::.:.|.||||:|.          |.|:::...|         
Zfish   272 THGREILQLLQDVFSLLPVATVIDNKVLIVHGGISDKTDLDFLSTVERHKVKSALRLPKRSTDHL 336

  Fly   281 ----------------------------------------------------------------- 280
                                                                             
Zfish   337 TVRSCSRSSSRNRGRNSRSSSRHSSRSRRKKLSKQGSRSSSSSSSSSSSSSMCSPRVSAKNTPRR 401

  Fly   281 -------------LDRF--KEPP-------AFGPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCS 323
                         ||.|  .|||       .:..:.|:|||||       |:.:..:.||.||..
Zfish   402 PPPSPTDMLQVPFLDSFVSLEPPELPREELEWQQVVDILWSDP-------KHQNGCSPNSFRGGG 459

  Fly   324 YFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 388
            .::........||.:.|..:||:||.:..||.:....|      :||||||.||.:..:|:.|.:
Zfish   460 CYFGPDVTQTLLQKHGLCLLIRSHECKQEGYELCHNGQ------VITIFSASNYYEEGSNRGAYV 518

  Fly   389 KYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICSDDEL--MTEESEEP 451
            |.              .|..:|.|   |.:.:.....|:|  |...:.:.....|  :.|:....
Zfish   519 KL--------------GPELVPRF---FQYQVSRSTRKLT--LHQRVRVAEGSALRALKEKLYAH 564

  Fly   452 LSDDEAALRKEVIRNKIR-AIGKMARVFSVLREESESVLQL----KGLTPTGALPLGALSGGKQS 511
            .|:..||.::..|.|..| :..:.|:|.       ||||:|    :.|.|..| .||  :.|...
Zfish   565 RSELMAAFQQYDINNTGRISTSEWAQVV-------ESVLRLDLPWRTLRPRLA-RLG--TDGNVE 619

  Fly   512 LKNAMQGFSPNHKI 525
            .::..:..||...|
Zfish   620 YESCFEDISPGEPI 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 95/411 (23%)
ppef1XP_021335306.1 IQ 32..54 CDD:197470
MPP_RdgC 132..532 CDD:277364 98/419 (23%)
EFh_PEF 567..715 CDD:330173 21/77 (27%)
EF-hand motif 567..600 CDD:320054 12/39 (31%)
EF-hand motif 609..649 CDD:320054 7/28 (25%)
EFh 650..716 CDD:238008
EF-hand motif 650..683 CDD:320054
EF-hand motif 690..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.