DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and gsp-2

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001022616.1 Gene:gsp-2 / 3564807 WormBaseID:WBGene00001748 Length:333 Species:Caenorhabditis elegans


Alignment Length:322 Identity:114/322 - (35%)
Similarity:179/322 - (55%) Gaps:38/322 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQ 160
            ::.:.:.|..||...:         ::.|:....:.|....:...:..::::|||:.:|||:|||
 Worm    12 ISRLLEVRGSKPGKNV---------QLTESEIKGLCQKSREIFLSQPILLELEAPLKICGDVHGQ 67

  Fly   161 FYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEY 225
            :|||::|||.||.|..:.|||||||||||..|:|.:..|.:.||.||:..|||||||||..:...
 Worm    68 YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 132

  Fly   226 FTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAF 290
            :.|..|||.:|:.:::....|.|:|||:||:::::..|.||||||::..:|.|||:.|..:.|..
 Worm   133 YGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQ 197

  Fly   291 GPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYR 355
            |.:||||||||.:|......:|       ||.|:.:.......||..::|..|.|||:..:.||.
 Worm   198 GLLCDLLWSDPDKDVTGWGEND-------RGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYE 255

  Fly   356 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS----------PHPY 407
            .:.|.|      |:|:||||||...::|..:::..:..:|      ||          .:||
 Worm   256 FFAKRQ------LVTLFSAPNYCGEFDNAGSMMTVDETLM------CSFQILKPADKKKYPY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 112/311 (36%)
gsp-2NP_001022616.1 PTZ00480 5..315 CDD:185658 114/322 (35%)
MPP_PP1_PPKL 7..297 CDD:277359 112/312 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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