DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and gsp-1

DIOPT Version :10

Sequence 1:NP_523373.2 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:308 Identity:116/308 - (37%)
Similarity:170/308 - (55%) Gaps:31/308 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQ 160
            |.||...|.|||            ..:.||....:......:...:..::::|||:.:|||||||
 Worm    16 LLEVRGCRPGKP------------VTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQ 68

  Fly   161 FYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEY 225
            :.||::|||.||.|....|||||||||||..|:|.:..|.:.|:.||:..|||||||||..:...
 Worm    69 YNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRI 133

  Fly   226 FTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAF 290
            :.|..|||.::|.:::....|.|:|||:|||::::..|.||||||::..:|.|||:.|..:.|..
 Worm   134 YGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDT 198

  Fly   291 GPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYR 355
            |.:||||||||.:|......:|       ||.|:.:.......||..::|..|.|||:..:.||.
 Worm   199 GLLCDLLWSDPDKDVTGWGEND-------RGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYE 256

  Fly   356 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS 403
            .:.|.|      |:|:||||||...::|...::..:..:|      ||
 Worm   257 FFAKRQ------LVTLFSAPNYCGEFDNAGGMMSVDETLM------CS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_523373.2 MPP_PP2B 107..411 CDD:277361 110/297 (37%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 116/308 (38%)

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