DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and gsp-1

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:308 Identity:116/308 - (37%)
Similarity:170/308 - (55%) Gaps:31/308 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQ 160
            |.||...|.|||            ..:.||....:......:...:..::::|||:.:|||||||
 Worm    16 LLEVRGCRPGKP------------VTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQ 68

  Fly   161 FYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEY 225
            :.||::|||.||.|....|||||||||||..|:|.:..|.:.|:.||:..|||||||||..:...
 Worm    69 YNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRI 133

  Fly   226 FTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAF 290
            :.|..|||.::|.:::....|.|:|||:|||::::..|.||||||::..:|.|||:.|..:.|..
 Worm   134 YGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDT 198

  Fly   291 GPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYR 355
            |.:||||||||.:|......:|       ||.|:.:.......||..::|..|.|||:..:.||.
 Worm   199 GLLCDLLWSDPDKDVTGWGEND-------RGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYE 256

  Fly   356 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS 403
            .:.|.|      |:|:||||||...::|...::..:..:|      ||
 Worm   257 FFAKRQ------LVTLFSAPNYCGEFDNAGGMMSVDETLM------CS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 110/297 (37%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 116/308 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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