DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2B-14D and C47A4.3

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_502650.1 Gene:C47A4.3 / 178340 WormBaseID:WBGene00008124 Length:316 Species:Caenorhabditis elegans


Alignment Length:333 Identity:120/333 - (36%)
Similarity:176/333 - (52%) Gaps:50/333 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 KERVVDSVPFPPSHKLTLAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKT 143
            :..||||:         :.:|....|    ||......|.|.|:     ||::.....:.:.:|.
 Worm     2 QNNVVDSI---------IIDVLSAST----HEKPLCKVITEERV-----LKLLDLALGVFKAQKP 48

  Fly   144 MIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQ 208
            |:::.||:.|||||||||.||::||..||.|.:..|||||||||||.||||.::.|.:.|:.:|.
 Worm    49 MVEVNAPIKVCGDIHGQFPDLLRLFHRGGWPPTANYLFLGDYVDRGRFSIETIVLLLAYKVKFPC 113

  Fly   209 TLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEI 272
            ..|||||||||..:.:.:.|.:||:.:| |.|:|.|..|.|:.|||..|:..:.||:||||||.:
 Worm   114 NFFLLRGNHECEFVNKTYGFYEECQKRYQSVRMYAAFQDVFNWLPLTGLIATKILCMHGGLSPLM 178

  Fly   273 HE---LEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYA--ACC 332
            .:   |:.:|:::|..|... |.:.||||:||:...     |.|..:....||.:.....  .|.
 Worm   179 TKEFTLDTLRKIERPTEGKE-GLVADLLWADPISGL-----SGFMNNQRGAGCGFGRDSVLNLCS 237

  Fly   333 DFLQNNNLLSIIRAHEAQDAGYRMY--RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 395
            :|    .|..:.|||:....||..:  ||        |:||||||:|...::|.||.:..:    
 Worm   238 EF----QLDLVCRAHQVVQDGYEFFAGRK--------LVTIFSAPHYCGQFDNCAAFMSCD---- 286

  Fly   396 NIRQFNCS 403
              .:..||
 Worm   287 --EKLQCS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 114/305 (37%)
C47A4.3NP_502650.1 MPP_superfamily 5..298 CDD:301300 120/330 (36%)
PP2Ac 27..299 CDD:197547 112/295 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.