DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2B-14D and R08C7.8

DIOPT Version :10

Sequence 1:NP_523373.2 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_500563.2 Gene:R08C7.8 / 177208 WormBaseID:WBGene00019951 Length:362 Species:Caenorhabditis elegans


Alignment Length:354 Identity:107/354 - (30%)
Similarity:166/354 - (46%) Gaps:47/354 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LHGGHTAVNTKERVVDSVPFPPSHKLTLAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQD 133
            ::.|.:.|...:|:::       |.|... |.|..|.|..:.:|::   .|..::..||      
 Worm     1 MYEGESVVQLAKRMIE-------HLLKWG-VTDAFTDKQIYTILEK---AESTLKPLPA------ 48

  Fly   134 GAALLRQEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLY 198
                      |:.:|.|:|:.||||||...|::.|:..|.|...::||||||||||..|.|..|.
 Worm    49 ----------MLQVEHPITIVGDIHGQLDALIRYFDAVGYPPKVQFLFLGDYVDRGAKSFEVSLL 103

  Fly   199 LWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLC 263
            |:..||.||..:.||||||||..:...:.|.:|...|...|::....:.|:.|||.|.:.|:.||
 Worm   104 LFCYKIRYPHLVHLLRGNHECMKMNRLYGFYEELTRKRGGRMWRQYQNVFNELPLCARVGQRILC 168

  Fly   264 VHGGLSPEIHELEDIRRLDRFKEPPAF--GPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFY 326
            :|||:|...:..|..:.|.:...|...  |...||:|:||.:|..|.     :..|..|..|..:
 Worm   169 MHGGISQNCNSWESFKALKKPNTPLTCDEGLQVDLMWADPTQDKCNT-----FAMNKQRAISVVF 228

  Fly   327 SYAACCDFLQNNNLLSIIRAHEAQDAGYR-MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL-- 388
            ......|||:...|..|:||||....|:. ::.|       ..:|:||||.|.....|..|::  
 Worm   229 GQKGLDDFLKKLGLSLIVRAHEVSQEGFNFLFNK-------KCVTVFSAPYYCGNDTNCGAIMHV 286

  Fly   389 --KYENNVMNIR-QFNCSPHPYWLPNFMD 414
              .||.:...:| :...:|..:.:...|:
 Worm   287 SDSYELSFTVLRPRMIATPENFEIVKLME 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_523373.2 MPP_PP2B 107..411 CDD:277361 97/311 (31%)
R08C7.8NP_500563.2 PP2Ac 27..299 CDD:197547 97/302 (32%)

Return to query results.
Submit another query.