DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and R13A5.11

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001299879.1 Gene:R13A5.11 / 176075 WormBaseID:WBGene00020053 Length:459 Species:Caenorhabditis elegans


Alignment Length:409 Identity:126/409 - (30%)
Similarity:186/409 - (45%) Gaps:68/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QSSSVAQAA----TSARTVSAGSAEATDANSTASNNNNNSSSTAAA----------GNNSDNSSP 56
            :.|||...|    .|.||:|     .|:.|...:.:..|:...||.          ..||:....
 Worm    66 EKSSVRSMAKTQPPSGRTIS-----LTEINKPNALSKKNTEIKAAVEIQNRLTKKMAKNSERRKQ 125

  Fly    57 TTGTGTGASTGKLHGGH-TAVNTKERVVDSVPFPPSHKLTLAEVFDQRTGKPNHELLKQHFILEG 120
            ..           ||.. ||.|..:..:|.|.|...|...:      :.|....:..|:.|    
 Worm   126 MA-----------HGPEMTAQNRTQERIDFVDFLDRHYQVI------QAGVHKIQYTKEEF---- 169

  Fly   121 RIEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDY 185
                   ..:|.:...:...||.::||:.|..|.||:||||.||:.:|.:.|.|..|.|:|.|||
 Worm   170 -------ENVIYEAQTIFSSEKALVDIDPPCVVVGDLHGQFNDLINMFILLGRPPETVYVFTGDY 227

  Fly   186 VDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKI---KYSERVYDACMDA 247
            ||||..|:||::.|::.||.||:.:.|||||||...:.:.:.|.:||..   |..|.::......
 Worm   228 VDRGMMSLECIMLLFTYKICYPENIVLLRGNHEIARVNKKYGFYEECVTSIPKCGEEIWALFQRC 292

  Fly   248 FDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSD 312
            |:.||::||:..:.||:||||||.:..|:::|...:....|..|.:.|:||:||       ..|.
 Worm   293 FNNLPISALIATKILCMHGGLSPALTCLDELRNHPKPIRNPFRGIVNDMLWADP-------DPSV 350

  Fly   313 FYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMY--RKSQTTGFPSLITIFSAP 375
            |....|.||..:.:......|..:...:..|||||:....||.:.  ||        ||||||||
 Worm   351 FEWKASSRGSGFTFGTNVIDDVCKRLGVELIIRAHQMCFDGYWVLSGRK--------LITIFSAP 407

  Fly   376 NYLDVYNNKAAVLKYENNV 394
            .|.:.|.|...|||.:..:
 Worm   408 MYCNFYKNAGCVLKVDETL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 101/293 (34%)
R13A5.11NP_001299879.1 PP2Ac 164..437 CDD:197547 101/289 (35%)
MPP_PPP_family 194..422 CDD:277316 92/242 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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