DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and pef-1

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_741091.1 Gene:pef-1 / 175257 WormBaseID:WBGene00003969 Length:707 Species:Caenorhabditis elegans


Alignment Length:650 Identity:146/650 - (22%)
Similarity:248/650 - (38%) Gaps:211/650 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSNNQS-SSVAQAATSARTVSAGSAEATDANSTASNNNNNSSSTAAAGNNSDNSSPTTGTGTGAS 65
            ||..|: |:..:.:|.|.|.:..|::..:.|   .||.|.|||   :||..::|          |
 Worm     6 SSGRQNPSTELKKSTRATTTTTSSSQRNNYN---DNNQNTSSS---SGNKKESS----------S 54

  Fly    66 TGKLHGGHTA--VNTKERVVDSVPFPPSHKLTLA------------------------EVFD--Q 102
            :.|.|....:  .|:|:....|    |..:||:.                        ::|.  :
 Worm    55 SSKQHSSKKSKKSNSKKNRSPS----PQPQLTIKSAILIQKWYRRCEARLEARRRATWQIFTALE 115

  Fly   103 RTGKPNHELLKQHF--ILEGRIEE-----------APALKIIQDGA--ALLRQE----KTMIDIE 148
            ..|:.:...|...|  ::....||           :|.:..:...|  :|:..|    |.|::..
 Worm   116 YAGEQDQLKLYDFFADVIRAMAEENGKGGVENGRNSPLMSALSHYAKPSLMDSEGETVKKMLEDT 180

  Fly   149 AP--------------------------------------------------------------- 150
            :|                                                               
 Worm   181 SPTNVDIDRNYKGPTLSLPLDKPQVAKMIEAFKVNKVLHPKYVLMILHEARKIFKAMPSVSRIST 245

  Fly   151 -----VTVCGDIHGQFYDLMKLFEVGGSPA-STKYLFLGDYVDRGYFSIECVLYLWSLKITYPQT 209
                 ||:|||:||:|.||..:....|.|: ...|:|.||:||||..|||.:..|::|.|..|.:
 Worm   246 SISNQVTICGDLHGKFDDLCIILYKNGYPSVDNPYIFNGDFVDRGGQSIEVLCVLFALVIVDPMS 310

  Fly   210 LFLLRGNHECRHLTEYFTFKQECKIKYSE------RVYDACMDAFDCLPLAALMNQQFLCVHGGL 268
            ::|.|||||...:...:.|.:|...||.:      |:.:   |.|..||:|.::::....||||:
 Worm   311 IYLNRGNHEDHIMNLRYGFIKELSTKYKDLSTPITRLLE---DVFSWLPIATIIDRDIFVVHGGI 372

  Fly   269 S--PEIHELEDIRRLDRFK---EPPA-----------------FGPMCDLLWSDPLEDFGNEKNS 311
            |  .|:.:|:.|.| .||:   .||.                 :..|.|::||||.::.|     
 Worm   373 SDQTEVSKLDKIPR-HRFQSVLRPPVNKGMESEKENSAVNVDEWKQMLDIMWSDPKQNKG----- 431

  Fly   312 DFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPN 376
              ...|..||...::.......||:.:....::|:||.:..||.....:      :.:|:|||.|
 Worm   432 --CWPNVFRGGGSYFGADITASFLEKHGFRLLVRSHECKFEGYEFSHNN------TCLTVFSASN 488

  Fly   377 YLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICSDD 441
            |.:..:|:.|.:|:         ...|..|::: .:|...|.....:.|::..:          :
 Worm   489 YYETGSNRGAYVKF---------IGKSKQPHFV-QYMASKTHRKSTLRERLGVV----------E 533

  Fly   442 ELMTEESEEPLSDDEAALRKEVIRNKIRAIGKMARVFSVLREESESVLQLKGLTPTGALPLGALS 506
            |...:|.:|.||.....|:||.....|...||:.     :.:.|:.|.::.||.    ||..||:
 Worm   534 ESAVKELKEKLSSFHTDLQKEFEIMDIEKSGKLP-----ILKWSDCVERITGLN----LPWIALA 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 95/419 (23%)
pef-1NP_741091.1 MPP_RdgC 199..515 CDD:277364 84/342 (25%)
PP2Ac 218..514 CDD:197547 84/322 (26%)
EFh 634..699 CDD:238008
EF-hand_7 634..698 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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