DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and C06A1.3

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_496276.1 Gene:C06A1.3 / 174626 WormBaseID:WBGene00007354 Length:364 Species:Caenorhabditis elegans


Alignment Length:377 Identity:123/377 - (32%)
Similarity:183/377 - (48%) Gaps:49/377 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 STASNNNNNSSSTAAAGNNSDNSSPTTGTGTGASTGKLHGGHTAVNTKERVVDSVPFPPS-HKLT 95
            ||..|||...|      .....||..:.........||         .|.:.|.:....| :|.|
 Worm     2 STDGNNNKKGS------KEGPKSSEISKFDLAKENPKL---------AEWMDDCIKRMNSLYKDT 51

  Fly    96 LAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQ 160
            ...:.:..||   ||:                :.||:...|:..:|..:.:.|||:.|.||||.|
 Worm    52 NINICNVMTG---HEI----------------ISIIRMVEAIFMEESNLCEAEAPIKVIGDIHAQ 97

  Fly   161 FYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEY 225
            :.|:.:||::.|.....|.:|||||||||...||.::.|:.|||.|...::|||||||...:.:.
 Worm    98 YQDMNRLFDLIGRVPEEKLMFLGDYVDRGPQGIEVLILLFCLKIRYRDRIYLLRGNHETPSVNKI 162

  Fly   226 FTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAF 290
            :.|..||:.||...::......|:.:|::.|::::.||:|||||||:..|:.||.:.|..||...
 Worm   163 YGFYVECQYKYGIGLWWDFQSCFNRMPMSGLISKRVLCMHGGLSPELINLDTIRNIPRPCEPLDR 227

  Fly   291 GPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYR 355
            |.:.|||||||     ..|...::  :|:||.||.:.........::..:..|||||:....||.
 Worm   228 GLLIDLLWSDP-----TNKGEGWF--HSIRGISYMFGKGVVEQACKSLEIDLIIRAHQVVQDGYE 285

  Fly   356 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 406
            |     .|| ..|||:||.|||...:.|.|||:....|: ::.:|....|.|
 Worm   286 M-----MTG-RRLITVFSVPNYCAQFTNAAAVVCLNANLQISFQQMIPPPLP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 106/301 (35%)
C06A1.3NP_496276.1 MPP_superfamily 37..327 CDD:301300 110/321 (34%)
PP2Ac 59..329 CDD:197547 106/301 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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