DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2B-14D and F52H3.6

DIOPT Version :10

Sequence 1:NP_523373.2 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_496167.1 Gene:F52H3.6 / 174561 WormBaseID:WBGene00009948 Length:329 Species:Caenorhabditis elegans


Alignment Length:267 Identity:99/267 - (37%)
Similarity:146/267 - (54%) Gaps:13/267 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 IEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYV 186
            |.||....:|:....:|..:.||::::||:.||||||||:.||:::|.....|....||||||||
 Worm    26 INEADIDVVIEKCTKILLAQATMVEVQAPIAVCGDIHGQYTDLLRIFNRCSFPPDQNYLFLGDYV 90

  Fly   187 DRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCL 251
            |||...:|.:..|.:.||.||...|:|||||||..:...:.|..|||.:||..:|:...:.|:.|
 Worm    91 DRGRQQLEVICLLMAYKIRYPNRFFILRGNHECASINRTYGFYDECKRRYSLALYNDFQNLFNHL 155

  Fly   252 PLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYTH 316
            ||.|:::.:..|:|||||.::.....:..:.|..:||......||||:||      |.|...:..
 Worm   156 PLCAMISGRIFCMHGGLSQKLVSWTQLAEITRPFDPPNNSLAMDLLWADP------ENNMTGWAE 214

  Fly   317 NSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVY 381
            :| ||.|..:......||.:..|:..|.|.|:....||..:...:      |:||||||.|...:
 Worm   215 SS-RGVSQIFGADVVKDFTEKMNIDLIARGHQVVQDGYEFFADKR------LVTIFSAPKYCGEF 272

  Fly   382 NNKAAVL 388
            :|.|||:
 Worm   273 DNNAAVM 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_523373.2 MPP_PP2B 107..411 CDD:277361 99/267 (37%)
F52H3.6NP_496167.1 MPP_superfamily 3..294 CDD:472684 99/267 (37%)

Return to query results.
Submit another query.