DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and gsp-3

DIOPT Version :9

Sequence 1:NP_001245715.1 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:264 Identity:93/264 - (35%)
Similarity:149/264 - (56%) Gaps:20/264 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ALLRQEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLW 200
            ::...:.:::::|.|:.||||||||:.||:::|:..|.|....:||||||||||..:||.:..:.
 Worm    42 SVFASQASLLEVEPPIIVCGDIHGQYSDLLRIFDKNGFPPDVNFLFLGDYVDRGRQNIETICLML 106

  Fly   201 SLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCV 264
            ..||.||:..|:|||||||..:...:.|.:||..:| |.|::....|.|:.:||..|:..:.||:
 Worm   107 CFKIKYPENFFMLRGNHECPAINRVYGFYEECNRRYKSTRLWSIFQDTFNWMPLCGLIGSRILCM 171

  Fly   265 HGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYTHN---SVRGCSYFY 326
            ||||||.:..|:.:|:|.|.::||......||||:||          |.:...   :.||.||.:
 Worm   172 HGGLSPHLQTLDQLRQLPRPQDPPNPSIGIDLLWADP----------DQWVKGWQANTRGVSYVF 226

  Fly   327 SYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYE 391
            ......|.....::..:.|||:....||..:...:      ::||||||:|...::|.||.:|.:
 Worm   227 GQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKK------MVTIFSAPHYCGQFDNSAATMKVD 285

  Fly   392 NNVM 395
            .|::
 Worm   286 ENMV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_001245715.1 MPP_PP2B 107..411 CDD:277361 93/264 (35%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:301300 93/264 (35%)
PP2Ac 29..299 CDD:197547 93/264 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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