DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2B-14D and gsp-3

DIOPT Version :10

Sequence 1:NP_523373.2 Gene:Pp2B-14D / 32624 FlyBaseID:FBgn0011826 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:264 Identity:93/264 - (35%)
Similarity:149/264 - (56%) Gaps:20/264 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ALLRQEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLW 200
            ::...:.:::::|.|:.||||||||:.||:::|:..|.|....:||||||||||..:||.:..:.
 Worm    42 SVFASQASLLEVEPPIIVCGDIHGQYSDLLRIFDKNGFPPDVNFLFLGDYVDRGRQNIETICLML 106

  Fly   201 SLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCV 264
            ..||.||:..|:|||||||..:...:.|.:||..:| |.|::....|.|:.:||..|:..:.||:
 Worm   107 CFKIKYPENFFMLRGNHECPAINRVYGFYEECNRRYKSTRLWSIFQDTFNWMPLCGLIGSRILCM 171

  Fly   265 HGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYTHN---SVRGCSYFY 326
            ||||||.:..|:.:|:|.|.::||......||||:||          |.:...   :.||.||.:
 Worm   172 HGGLSPHLQTLDQLRQLPRPQDPPNPSIGIDLLWADP----------DQWVKGWQANTRGVSYVF 226

  Fly   327 SYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYE 391
            ......|.....::..:.|||:....||..:...:      ::||||||:|...::|.||.:|.:
 Worm   227 GQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKK------MVTIFSAPHYCGQFDNSAATMKVD 285

  Fly   392 NNVM 395
            .|::
 Worm   286 ENMV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2B-14DNP_523373.2 MPP_PP2B 107..411 CDD:277361 93/264 (35%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:472684 93/264 (35%)

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