DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32750 and Upb1

DIOPT Version :9

Sequence 1:NP_727067.1 Gene:CG32750 / 326238 FlyBaseID:FBgn0052750 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_598756.1 Gene:Upb1 / 103149 MGIID:2143535 Length:393 Species:Mus musculus


Alignment Length:202 Identity:47/202 - (23%)
Similarity:76/202 - (37%) Gaps:56/202 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GVVEYR---PTFMGGTSEQL--LQANLAGYLEIMASGNGTTDIIVFPEATLN---SVITLTAVPK 88
            |:|:.|   || ....:||:  |..::....|:.|...  .:||.|.|| .|   :..|...:| 
Mouse    75 GLVQNRIPLPT-SAPVAEQVSALHKSIEEIAEVAAMCG--VNIICFQEA-WNMPFAFCTREKLP- 134

  Fly    89 FTEQSLCEEQGDDDPEIAPFLRSLAC--AAREYGTYLVVNVKERVSEQCTSDETCSSRGYSIHNT 151
            :||.:...|.|         |.:..|  .|:::...:|..:.||..|          .|..:.||
Mouse   135 WTEFAESAEDG---------LTTRFCQKLAKKHNMVVVSPILERDRE----------HGGVLWNT 180

  Fly   152 NVVFDRQGAVISRYRKWNL-----------YLEPSTNRTESPEIATFTTDF-----NVTFGHFIC 200
            .||....|.|:.:.||.::           |:|.:...      ..|.|.|     |:.:|....
Mouse   181 AVVISNSGLVMGKTRKNHIPRVGDFNESTYYMEGNLGH------PVFQTQFGRIAVNICYGRHHP 239

  Fly   201 FDMLFYT 207
            .:.|.|:
Mouse   240 LNWLMYS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32750NP_727067.1 biotinidase_like 29..322 CDD:143591 47/202 (23%)
Upb1NP_598756.1 PLN00202 6..392 CDD:177792 47/202 (23%)
ML_beta-AS 9..371 CDD:143611 47/202 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.