DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and UBI4

DIOPT Version :9

Sequence 1:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_013061.1 Gene:UBI4 / 850620 SGDID:S000003962 Length:381 Species:Saccharomyces cerevisiae


Alignment Length:380 Identity:365/380 - (96%)
Similarity:375/380 - (98%) Gaps:0/380 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:|||:|||||||||||||||||||||||||||||||||||||
Yeast     1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |||||||||||||||||||||||||||||.||||:|||:||||||||||||||||||||||||||
Yeast    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||||||||||||||||||||||||||||||||||||||||.||||:|||:|||||||||||||||
Yeast   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||.||||:|||:||||
Yeast   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 260

  Fly   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Yeast   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 325

  Fly   326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
            ||:|||:||||||||||||||||||||||||||||||||||||||||||||||||
Yeast   326 TIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398 71/74 (96%)
UBQ 1..72 CDD:214563 67/70 (96%)
Ubiquitin 77..152 CDD:176398 71/74 (96%)
UBQ 77..148 CDD:214563 67/70 (96%)
Ubiquitin 153..228 CDD:176398 71/74 (96%)
UBQ 153..224 CDD:214563 67/70 (96%)
Ubiquitin 229..304 CDD:176398 71/74 (96%)
UBQ 229..300 CDD:214563 67/70 (96%)
Ubiquitin 305..380 CDD:176398 71/74 (96%)
UBQ 305..376 CDD:214563 67/70 (96%)
Ubiquitin 381..456 CDD:176398 365/380 (96%)
UBQ 381..452 CDD:214563 365/380 (96%)
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
UBI4NP_013061.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ubl_ubiquitin 77..152 CDD:340501 71/74 (96%)
Ubl_ubiquitin 153..228 CDD:340501 71/74 (96%)
Ubl_ubiquitin 229..304 CDD:340501 71/74 (96%)
Ubl_ubiquitin 305..380 CDD:340501 71/74 (96%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I1046
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 707 1.000 Inparanoid score I90
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 1 1.000 - - otm46614
orthoMCL 1 0.900 - - OOG6_100667
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1586
SonicParanoid 1 1.000 - - X1758
TreeFam 1 0.960 - -
109.750

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