DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubi-p5E and UBQ13

DIOPT Version :9

Sequence 1:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_176714.4 Gene:UBQ13 / 842845 AraportID:AT1G65350 Length:319 Species:Arabidopsis thaliana


Alignment Length:319 Identity:286/319 - (89%)
Similarity:295/319 - (92%) Gaps:15/319 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly   294 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358
            |||||||||||||||||||||||||||||.||||:||||||||||||||||||||||||||||||
plant    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   359 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 423
            ||:| |||||||||||||||||||||||||||||||||||.||||:||||||||||.||||||||
plant   131 TLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 194

  Fly   424 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 488
            |||||||||||||:|||||||||||||||||||||||||||||||||||||.|.||:||||||||
plant   195 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD 259

  Fly   489 KEGIPPDQQRLIFAGKQLEDG--------------RTLSDYNIQKESTLHLVLRLRGGA 533
            |||||||||||||||||||.|              ..|:|||||||||||||||||||:
plant   260 KEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYNIQKESTLHLVLRLRGGS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398
UBQ 153..224 CDD:214563
Ubiquitin 229..304 CDD:176398 71/74 (96%)
UBQ 229..300 CDD:214563 67/70 (96%)
Ubiquitin 305..380 CDD:176398 70/74 (95%)
UBQ 305..376 CDD:214563 66/70 (94%)
Ubiquitin 381..456 CDD:176398 70/74 (95%)
UBQ 381..452 CDD:214563 66/70 (94%)
Ubiquitin 457..532 CDD:176398 67/88 (76%)
UBQ 457..528 CDD:214563 63/84 (75%)
UBQ13NP_176714.4 Ubiquitin 1..76 CDD:176398 71/74 (96%)
UBQ 1..72 CDD:214563 67/70 (96%)
Ubiquitin 77..151 CDD:176398 70/74 (95%)
UBQ 77..147 CDD:214563 66/70 (94%)
Ubiquitin 152..227 CDD:176398 70/74 (95%)
UBQ 152..223 CDD:214563 66/70 (94%)
UBQ 228..317 CDD:294102 67/88 (76%)
UBQ 228..313 CDD:214563 63/84 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

Return to query results.
Submit another query.