DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and UBQ12

DIOPT Version :9

Sequence 1:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_564675.1 Gene:UBQ12 / 841949 AraportID:AT1G55060 Length:230 Species:Arabidopsis thaliana


Alignment Length:229 Identity:206/229 - (89%)
Similarity:219/229 - (95%) Gaps:0/229 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369
            ||||:|||||||..||||.||||:||||||||.|||||||.|||||||||||||||:|||:|::|
plant     1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDS 65

  Fly   370 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 434
            ||||:||.|||||||||||||||||||||.||||:|:||||||||||||||||||||||||||||
plant    66 TLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   435 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
            ||:|||||||||||||||||||||||||||||||||||||.||||:||||||||||||.||||||
plant   131 TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRL 195

  Fly   500 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 533
            ||||||.||||||:|||||||||||||||||||:
plant   196 IFAGKQHEDGRTLADYNIQKESTLHLVLRLRGGS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398
UBQ 153..224 CDD:214563
Ubiquitin 229..304 CDD:176398
UBQ 229..300 CDD:214563
Ubiquitin 305..380 CDD:176398 61/74 (82%)
UBQ 305..376 CDD:214563 58/70 (83%)
Ubiquitin 381..456 CDD:176398 70/74 (95%)
UBQ 381..452 CDD:214563 66/70 (94%)
Ubiquitin 457..532 CDD:176398 69/74 (93%)
UBQ 457..528 CDD:214563 65/70 (93%)
UBQ12NP_564675.1 UBQ 1..76 CDD:294102 61/74 (82%)
UBQ 1..72 CDD:214563 58/70 (83%)
Ubiquitin 77..152 CDD:176398 70/74 (95%)
UBQ 77..148 CDD:214563 66/70 (94%)
Ubiquitin 153..228 CDD:176398 69/74 (93%)
UBQ 153..224 CDD:214563 65/70 (93%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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