DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and UBQ4

DIOPT Version :9

Sequence 1:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_568397.1 Gene:UBQ4 / 832184 AraportID:AT5G20620 Length:382 Species:Arabidopsis thaliana


Alignment Length:381 Identity:365/381 - (95%)
Similarity:376/381 - (98%) Gaps:0/381 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly   218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 282
            |||||||||||||||||||||||||||||.||||:||||||||||||||||||||||||||||||
plant    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   283 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
            ||:|||||||||||||||||||||||||||||||||||||.||||:|||||||||||||||||||
plant   131 TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195

  Fly   348 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 412
            |||||||||||||:|||||||||||||||||||||||||||||||||||||.||||:||||||||
plant   196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 260

  Fly   413 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 477
            ||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||.||
plant   261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 325

  Fly   478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 533
            ||:||||||||||||||||||||||||||||||||:|||||||||||||||||||:
plant   326 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398 71/74 (96%)
UBQ 153..224 CDD:214563 67/70 (96%)
Ubiquitin 229..304 CDD:176398 71/74 (96%)
UBQ 229..300 CDD:214563 67/70 (96%)
Ubiquitin 305..380 CDD:176398 71/74 (96%)
UBQ 305..376 CDD:214563 67/70 (96%)
Ubiquitin 381..456 CDD:176398 71/74 (96%)
UBQ 381..452 CDD:214563 67/70 (96%)
Ubiquitin 457..532 CDD:176398 71/74 (96%)
UBQ 457..528 CDD:214563 67/70 (96%)
UBQ4NP_568397.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ubl_ubiquitin 77..152 CDD:340501 71/74 (96%)
Ubl_ubiquitin 153..228 CDD:340501 71/74 (96%)
Ubl_ubiquitin 229..304 CDD:340501 71/74 (96%)
Ubl_ubiquitin 305..380 CDD:340501 71/74 (96%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100667
Panther 1 1.100 - - O PTHR10666
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.770

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