DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and Ubqln5

DIOPT Version :9

Sequence 1:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_081910.1 Gene:Ubqln5 / 70980 MGIID:1918230 Length:510 Species:Mus musculus


Alignment Length:259 Identity:68/259 - (26%)
Similarity:94/259 - (36%) Gaps:78/259 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EPSDTIENVKAKI-QD---------------KEGIP------PDQQRLIFAGKQLEDGRTLSDYN 60
            |||..|..|..|. ||               |:.|.      .|:..|||.||.|.|...||...
Mouse    18 EPSSRIIRVSVKTPQDCHEFFLAENSNVRRFKKQISKYLHCNADRLVLIFTGKILRDQDILSQRG 82

  Fly    61 IQKESTLHLVLR--LRGGMQIFVKTLTGKT--ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
            |...||:|:|:|  |:|  .....||.|.|  .|...|||       ||:....|..||      
Mouse    83 ILDGSTVHVVVRSHLKG--SACTGTLVGPTGQYTHRSEPS-------AKLGRLAGTSPD------ 132

  Fly   122 AGKQLEDGRTLSDYNIQK--------ESTLHLV----------LRLRGGMQIFVKTLTGKTITLE 168
                      |:|:..|:        ||.:.|:          .:...|:.|   ..|.||:...
Mouse   133 ----------LADFFSQRVQLLPAAPESVVQLLEDPLIQGLANEKHANGVHI---PETSKTVQKR 184

  Fly   169 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-----RTLSDYNIQKESTLHLVLRLRG 227
            .......|.::...|.:|.:...:||| .|.|.:..|     .:.||.:....|||.|::..:|
Mouse   185 DPALKFPETLQKPAQSQEVLQEHKQRL-EALKAVPGGDNAMHPSCSDIHQVMLSTLALLVASKG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398 27/81 (33%)
UBQ 1..72 CDD:214563 25/75 (33%)
Ubiquitin 77..152 CDD:176398 19/94 (20%)
UBQ 77..148 CDD:214563 19/90 (21%)
Ubiquitin 153..228 CDD:176398 20/80 (25%)
UBQ 153..224 CDD:214563 19/75 (25%)
Ubiquitin 229..304 CDD:176398
UBQ 229..300 CDD:214563
Ubiquitin 305..380 CDD:176398
UBQ 305..376 CDD:214563
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubqln5NP_081910.1 UBQ 24..94 CDD:214563 21/69 (30%)
UBQ 24..94 CDD:294102 21/69 (30%)
UBA_PLICs 467..506 CDD:270582
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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