DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and CG10694

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster


Alignment Length:276 Identity:55/276 - (19%)
Similarity:118/276 - (42%) Gaps:41/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
            |::.::.|..:|||||:..|..:..:|.|:.:  :..:|.:..:||::|:.:||...||:|.|.:
  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65

  Fly    64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP---PDQQ---RLIFA 122
            :..:.|:.:         |.:...:...:|.|:..:......::.::.:|   |:.|   .|:..
  Fly    66 DKIIVLMGK---------KKVDKSSPEEKVAPTPPLAAGPNVLRTEDVVPSLAPNDQWVSDLMSM 121

  Fly   123 GKQLEDGRTL--SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI--- 182
            |...|:.|:.  :.:|..:.:..:|:    .|:...|.:..|......|:.||.::.:.|.:   
  Fly   122 GYGEEEVRSALRASFNHPERAIEYLI----NGIPQEVVSEQGLAAIPSVQTSDQLQQLMADLNIT 182

  Fly   183 -------QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
                   |:.|.|.....||...     |..|...:...:|..::::   .||.......:....
  Fly   183 RMREMINQNPELIHRLMNRLAET-----DPATFEVFQRNQEELMNMI---SGGASRTPNEIEHLQ 239

  Fly   241 ITLEVEPSDTIENVKA 256
            |||..|.:..:..::|
  Fly   240 ITLTAEETAAVGRLEA 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 21/76 (28%)
Ubl_ubiquitin 77..152 CDD:340501 12/82 (15%)
Ubl_ubiquitin 153..228 CDD:340501 14/84 (17%)
Ubl_ubiquitin 229..304 CDD:340501 5/28 (18%)
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
CG10694NP_651212.1 rad23 1..284 CDD:273167 55/276 (20%)
Blue background indicates that the domain is not in the aligned region.

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