DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and zgc:56596

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_956594.1 Gene:zgc:56596 / 393270 ZFINID:ZDB-GENE-040426-1089 Length:157 Species:Danio rerio


Alignment Length:161 Identity:46/161 - (28%)
Similarity:72/161 - (44%) Gaps:33/161 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:.||.|.||...::|..::.:..||..:.::..||..||||::.||.|.|...||||:|..|:
Zfish     1 MILTVKPLQGKECNVQVTENEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDYSIGPEA 65

  Fly    66 TLHLVLRL-----------------RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 113
            .|:||:|.                 :||..::  .|....:.....|:|.     ||:|  |.:.
Zfish    66 KLNLVVRPAGERSSGAVGTSSANNDKGGSGVW--QLLSTVLAKHFSPADA-----AKVQ--EQLI 121

  Fly   114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 144
            .|.:|.:   :||    :|.|........||
Zfish   122 KDYERSL---RQL----SLDDIERLASRLLH 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 29/91 (32%)
Ubl_ubiquitin 77..152 CDD:340501 15/68 (22%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
zgc:56596NP_956594.1 Ubl_UBL4A_like 1..72 CDD:340505 28/70 (40%)
Tugs 97..143 CDD:465528 13/61 (21%)
Blue background indicates that the domain is not in the aligned region.

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